Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC009237.13-201ENST00000603193 276 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 AC013468.1-201ENST00000608680 598 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 AL139124.1-201ENST00000609123 421 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ABCD3P28288 AC005840.5-201ENST00000619166 599 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ABCD3P28288 AC010608.3-201ENST00000625048 527 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ABCD3P28288 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
ABCD3P28288 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ABCD3P28288 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.03□□□□□ -1.6
ABCD3P28288 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ABCD3P28288 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ABCD3P28288 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ABCD3P28288 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.03□□□□□ -1.6
ABCD3P28288 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ABCD3P28288 AC007938.2-201ENST00000604666 2634 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.03□□□□□ -1.6
ABCD3P28288 USP9YP4-201ENST00000424401 1745 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ABCD3P28288 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.03□□□□□ -1.6
ABCD3P28288 AL353743.4-201ENST00000422653 1547 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ABCD3P28288 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ABCD3P28288 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
ABCD3P28288 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ABCD3P28288 AL450326.2-201ENST00000421913 1962 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ABCD3P28288 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ABCD3P28288 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ABCD3P28288 AL022311.1-201ENST00000623726 19416 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.02□□□□□ -1.61
ABCD3P28288 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.02□□□□□ -1.61
ABCD3P28288 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ABCD3P28288 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
ABCD3P28288 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ABCD3P28288 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ABCD3P28288 AL603865.2-201ENST00000401679 213 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 RNU2-65P-201ENST00000410162 185 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.02□□□□□ -1.61
ABCD3P28288 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.02□□□□□ -1.61
ABCD3P28288 SRSF1P1-201ENST00000424058 520 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 RPL12P17-201ENST00000432393 498 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 CYCSP12-201ENST00000437729 300 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.02□□□□□ -1.61
ABCD3P28288 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.02□□□□□ -1.61
ABCD3P28288 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.02□□□□□ -1.61
ABCD3P28288 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.02□□□□□ -1.61
ABCD3P28288 AC092809.1-201ENST00000441469 474 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.02□□□□□ -1.61
ABCD3P28288 AL672138.1-201ENST00000450604 1015 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.02□□□□□ -1.61
ABCD3P28288 TVP23BP2-201ENST00000455082 615 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 BX248409.1-201ENST00000455497 255 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.02□□□□□ -1.61
ABCD3P28288 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ABCD3P28288 SIAH1P1-201ENST00000479411 923 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 EIF3LP3-201ENST00000495197 822 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 IGBP1P5-201ENST00000507524 1000 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 HMGB1P44-201ENST00000508597 572 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 AC109464.1-201ENST00000511091 819 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 ATP5LP3-201ENST00000514223 304 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.02□□□□□ -1.61
ABCD3P28288 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.02□□□□□ -1.61
ABCD3P28288 SMARCE1P4-201ENST00000523647 241 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.02□□□□□ -1.61
ABCD3P28288 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.02□□□□□ -1.61
ABCD3P28288 BLZF2P-201ENST00000553776 1130 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ABCD3P28288 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ABCD3P28288 CYP2C60P-201ENST00000566088 139 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.02□□□□□ -1.61
ABCD3P28288 AL022067.1-201ENST00000602426 454 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 AC069431.2-201ENST00000604149 1099 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 Z82195.1-201ENST00000604558 398 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 AC009948.4-201ENST00000604692 675 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 AC084824.4-201ENST00000620106 731 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.02□□□□□ -1.61
ABCD3P28288 AC073869.8-201ENST00000641806 335 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ABCD3P28288 AL049737.1-201ENST00000413920 1403 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 AL034370.1-201ENST00000397254 1590 ntBASIC5.02□□□□□ -1.61
ABCD3P28288 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ABCD3P28288 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
ABCD3P28288 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
ABCD3P28288 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ABCD3P28288 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
ABCD3P28288 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ABCD3P28288 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.02□□□□□ -1.61
ABCD3P28288 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ABCD3P28288 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ABCD3P28288 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
ABCD3P28288 AP001029.2-203ENST00000589795 4910 ntBASIC5.01□□□□□ -1.61
ABCD3P28288 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.01□□□□□ -1.61
ABCD3P28288 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ABCD3P28288 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ABCD3P28288 AC119744.1-201ENST00000454746 1715 ntBASIC5.01□□□□□ -1.61
ABCD3P28288 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.01□□□□□ -1.61
ABCD3P28288 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.01□□□□□ -1.61
ABCD3P28288 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms