Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATF4P18848 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC5.83□□□□□ -1.48
ATF4P18848 FAM157B-203ENST00000639350 358 ntBASIC5.83□□□□□ -1.48
ATF4P18848 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATF4P18848 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.83□□□□□ -1.48
ATF4P18848 TATDN2P3-201ENST00000452855 3665 ntBASIC5.83□□□□□ -1.48
ATF4P18848 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATF4P18848 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATF4P18848 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATF4P18848 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ATF4P18848 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATF4P18848 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.83□□□□□ -1.48
ATF4P18848 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.83□□□□□ -1.48
ATF4P18848 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.83□□□□□ -1.48
ATF4P18848 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
ATF4P18848 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATF4P18848 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATF4P18848 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATF4P18848 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ATF4P18848 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATF4P18848 AC010401.2-201ENST00000575137 4934 ntBASIC5.82□□□□□ -1.48
ATF4P18848 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
ATF4P18848 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATF4P18848 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC5.82□□□□□ -1.48
ATF4P18848 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATF4P18848 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATF4P18848 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATF4P18848 RNA5SP301-201ENST00000362537 121 ntBASIC5.82□□□□□ -1.48
ATF4P18848 RNU6-744P-201ENST00000365557 107 ntBASIC5.82□□□□□ -1.48
ATF4P18848 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
ATF4P18848 RNU6-1316P-201ENST00000384242 108 ntBASIC5.82□□□□□ -1.48
ATF4P18848 SNORD115.1-201ENST00000391109 76 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AP003170.5-201ENST00000397185 335 ntBASIC5.82□□□□□ -1.48
ATF4P18848 RPL5P35-201ENST00000398869 816 ntBASIC5.82□□□□□ -1.48
ATF4P18848 LSM5-202ENST00000409292 538 ntTSL 2 BASIC5.82□□□□□ -1.48
ATF4P18848 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.82□□□□□ -1.48
ATF4P18848 AC022028.1-201ENST00000412054 408 ntBASIC5.82□□□□□ -1.48
ATF4P18848 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.82□□□□□ -1.48
ATF4P18848 SPA17P1-201ENST00000416656 452 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AL161742.1-201ENST00000418154 584 ntBASIC5.82□□□□□ -1.48
ATF4P18848 RPS15AP40-201ENST00000419621 391 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AL445669.1-201ENST00000426743 755 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AC099344.1-201ENST00000433548 492 ntBASIC5.82□□□□□ -1.48
ATF4P18848 HMGN1P6-201ENST00000438508 291 ntBASIC5.82□□□□□ -1.48
ATF4P18848 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.82□□□□□ -1.48
ATF4P18848 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.82□□□□□ -1.48
ATF4P18848 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC5.82□□□□□ -1.48
ATF4P18848 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.82□□□□□ -1.48
ATF4P18848 AC005297.2-201ENST00000450430 606 ntBASIC5.82□□□□□ -1.48
ATF4P18848 ATP5G1P6-201ENST00000451206 412 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC5.82□□□□□ -1.48
ATF4P18848 WBP1LP1-201ENST00000460451 896 ntBASIC5.82□□□□□ -1.48
ATF4P18848 PABPC1P10-201ENST00000464731 381 ntBASIC5.82□□□□□ -1.48
ATF4P18848 RPS20P21-201ENST00000466859 343 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AL136126.1-201ENST00000473603 402 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AC005550.2-201ENST00000476382 318 ntBASIC5.82□□□□□ -1.48
ATF4P18848 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC5.82□□□□□ -1.48
ATF4P18848 AC093267.1-201ENST00000489176 961 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC5.82□□□□□ -1.48
ATF4P18848 RPL9P6-201ENST00000492764 598 ntBASIC5.82□□□□□ -1.48
ATF4P18848 NMNAT1P4-201ENST00000505598 840 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AC093325.1-201ENST00000508378 326 ntBASIC5.82□□□□□ -1.48
ATF4P18848 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.82□□□□□ -1.48
ATF4P18848 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.82□□□□□ -1.48
ATF4P18848 EIF3KP1-201ENST00000513279 656 ntBASIC5.82□□□□□ -1.48
ATF4P18848 ADI1P2-201ENST00000514945 429 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AC027801.3-201ENST00000515049 698 ntBASIC5.82□□□□□ -1.48
ATF4P18848 RN7SKP82-201ENST00000516786 223 ntBASIC5.82□□□□□ -1.48
ATF4P18848 MTCO2P4-201ENST00000517968 247 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AP003467.2-201ENST00000520175 319 ntBASIC5.82□□□□□ -1.48
ATF4P18848 OXR1-212ENST00000521592 993 ntTSL 5 BASIC5.82□□□□□ -1.48
ATF4P18848 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.82□□□□□ -1.48
ATF4P18848 AC023245.2-201ENST00000530760 2978 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.82□□□□□ -1.48
ATF4P18848 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATF4P18848 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.82□□□□□ -1.48
ATF4P18848 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATF4P18848 AC089984.3-201ENST00000552838 363 ntBASIC5.82□□□□□ -1.48
ATF4P18848 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC5.82□□□□□ -1.48
ATF4P18848 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC5.82□□□□□ -1.48
ATF4P18848 CYCSP38-201ENST00000559840 322 ntBASIC5.82□□□□□ -1.48
ATF4P18848 IGHV1OR15-4-201ENST00000560037 348 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.82□□□□□ -1.48
ATF4P18848 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC5.82□□□□□ -1.48
ATF4P18848 MIR3913-1-201ENST00000577744 102 ntBASIC5.82□□□□□ -1.48
ATF4P18848 MIR4258-201ENST00000580920 91 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC5.82□□□□□ -1.48
ATF4P18848 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.82□□□□□ -1.48
ATF4P18848 AL606834.2-201ENST00000602954 668 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC5.82□□□□□ -1.48
ATF4P18848 AL451085.1-201ENST00000604546 690 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.82□□□□□ -1.48
ATF4P18848 AL139123.1-201ENST00000612008 430 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AC091304.9-201ENST00000612091 226 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC5.82□□□□□ -1.48
ATF4P18848 MIR6761-201ENST00000617899 72 ntBASIC5.82□□□□□ -1.48
ATF4P18848 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.82□□□□□ -1.48
ATF4P18848 AC004009.2-201ENST00000623016 728 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AC034229.6-201ENST00000623704 224 ntBASIC5.82□□□□□ -1.48
ATF4P18848 AC134981.1-201ENST00000628076 348 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms