Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MAPK10-253ENST00000641010 4072 ntBASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHKB-CPT1BH3BT56 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AL355852.1-201ENST00000454081 1771 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 RN7SKP160-201ENST00000363804 340 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 RNU1-43P-201ENST00000365052 165 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AL353625.1-202ENST00000366273 571 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 RNU1-44P-201ENST00000384453 163 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 MIR1266-201ENST00000408125 84 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC009237.5-201ENST00000414271 501 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 RPS23P10-201ENST00000416185 486 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 Z74021.1-201ENST00000423610 407 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 PLA2G12AP2-201ENST00000424744 264 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC092865.3-201ENST00000425390 1026 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 RPL12P28-201ENST00000430852 489 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AL451139.1-201ENST00000434718 346 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 GAPDHP59-201ENST00000435908 267 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 OR52U1P-201ENST00000439752 923 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AL356535.1-201ENST00000440335 398 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 RPS7P4-201ENST00000444127 582 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AL356133.1-201ENST00000444762 372 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC105399.1-202ENST00000447303 205 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC073850.1-201ENST00000449243 255 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC073476.1-201ENST00000452854 407 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AL389915.2-201ENST00000454576 441 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 RN7SL254P-201ENST00000460609 284 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 RN7SL330P-201ENST00000469709 307 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 RN7SL808P-201ENST00000496066 299 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 UBE2CP3-201ENST00000502715 450 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC005798.1-201ENST00000513715 387 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 LDHBP3-201ENST00000514909 822 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC036111.2-201ENST00000533247 901 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AL389895.1-201ENST00000554127 252 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 RPL7P50-201ENST00000600588 727 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC103792.1-201ENST00000603591 919 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC104687.2-201ENST00000604442 342 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AL353807.4-201ENST00000604995 257 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 CFTRP2-201ENST00000634304 199 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC008691.1-209ENST00000642094 814 ntBASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 NRK-204ENST00000540278 1687 ntTSL 2 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC2.49□□□□□ -2.01
CHKB-CPT1BH3BT56 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AC109780.1-201ENST00000451768 1344 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 PTMAP5-201ENST00000393073 333 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 EI24P2-201ENST00000397776 1076 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 OR52N3P-201ENST00000413417 934 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 UBTFL3-201ENST00000418934 1024 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 BX284632.2-201ENST00000421091 399 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 SRSF1P1-201ENST00000424058 520 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms