Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CDY12P-201ENST00000440679 1015 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 EEF1B2P5-201ENST00000444820 548 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 CDY13P-201ENST00000445813 1015 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 CDY23P-201ENST00000451661 1014 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 AL356390.1-201ENST00000455684 397 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 AC091917.2-201ENST00000505002 744 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 AC006499.3-201ENST00000506077 748 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 AP001880.2-201ENST00000538233 448 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 AC008033.2-201ENST00000542626 177 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 AL121834.1-201ENST00000572284 509 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 AC087763.1-201ENST00000603391 286 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 AL121612.2-201ENST00000612261 482 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 AL138721.1-201ENST00000616756 179 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 AC016769.4-201ENST00000616893 535 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 AP002799.1-201ENST00000623552 423 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 AC104118.1-201ENST00000607625 1589 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM49D1C9J1S8 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AC109780.1-201ENST00000451768 1344 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AC091046.3-201ENST00000631455 1574 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 RNA5SP191-201ENST00000362585 102 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 RNA5SP123-201ENST00000363244 119 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 MIR765-201ENST00000390226 114 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 Z98745.1-201ENST00000402553 494 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 VN1R8P-201ENST00000407739 893 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 RNU4-34P-201ENST00000410431 124 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AC002524.1-201ENST00000411687 547 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 EIF4EP1-201ENST00000422311 642 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AC007559.1-201ENST00000428736 355 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 RBMY2QP-201ENST00000429799 1147 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 MAPRE1P3-201ENST00000435438 796 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AL627308.1-201ENST00000435693 821 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 RN7SL515P-201ENST00000463999 297 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AC104763.1-201ENST00000475274 360 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 RNU2-30P-201ENST00000516209 141 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 HAUS8P1-201ENST00000549005 542 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AC051619.2-201ENST00000559063 397 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AC011487.3-201ENST00000593607 453 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AP003072.5-201ENST00000623872 773 ntBASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM49D1C9J1S8 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 AC139769.1-204ENST00000472297 1931 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 RNA5SP28-201ENST00000363841 119 ntBASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM49D1C9J1S8 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms