Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.36□□□□□ -1.55
TCRBV5S1A1TA0A578 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.36□□□□□ -1.55
TCRBV5S1A1TA0A578 CIR1P2-201ENST00000514821 1342 ntBASIC5.36□□□□□ -1.55
TCRBV5S1A1TA0A578 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV5S1A1TA0A578 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV5S1A1TA0A578 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV5S1A1TA0A578 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV5S1A1TA0A578 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.36□□□□□ -1.55
TCRBV5S1A1TA0A578 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TCRBV5S1A1TA0A578 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
TCRBV5S1A1TA0A578 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.36□□□□□ -1.55
TCRBV5S1A1TA0A578 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV5S1A1TA0A578 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 RNA5SP435-201ENST00000364044 108 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 RNU6-171P-201ENST00000384354 107 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 RNU6-31P-201ENST00000384388 108 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 RN7SKP114-201ENST00000410327 279 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AL356968.2-201ENST00000412769 1257 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC000041.1-201ENST00000439655 175 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AL450023.3-201ENST00000440592 271 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 CNOT7P2-201ENST00000441051 832 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC112492.1-201ENST00000449607 712 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 RN7SL222P-201ENST00000476452 299 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 RPS4XP6-201ENST00000477670 797 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC072052.1-201ENST00000496556 306 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 Y_RNA.688-201ENST00000516565 95 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 RNU6-1028P-201ENST00000517164 93 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC006349.1-201ENST00000555526 235 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC116553.2-201ENST00000564203 463 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AGGF1P6-201ENST00000569213 976 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 MIR4489-201ENST00000578869 62 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 MTCO2P22-201ENST00000603246 681 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC126915.2-201ENST00000610957 190 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AP002782.1-201ENST00000623107 614 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC139792.2-201ENST00000624218 587 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC068620.4-201ENST00000636730 1182 ntBASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.35□□□□□ -1.55
TCRBV5S1A1TA0A578 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 ATP5HP3-201ENST00000396994 486 ntBASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 SNORA77-201ENST00000408716 125 ntBASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 UBE2V1P11-201ENST00000411559 285 ntBASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 RPS29P9-201ENST00000440360 171 ntBASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 TCEA1P3-201ENST00000443005 880 ntBASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 CYCSP24-201ENST00000445119 316 ntBASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 FAR2P1-206ENST00000449736 709 ntBASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 PTGES3P5-201ENST00000455109 434 ntBASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 RPL7P39-201ENST00000481157 744 ntBASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 RPL7L1P4-201ENST00000513004 707 ntBASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 MRPS36P3-201ENST00000519284 130 ntBASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 AP002373.2-201ENST00000541631 1060 ntBASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 AL049830.4-201ENST00000555149 351 ntBASIC5.34□□□□□ -1.55
TCRBV5S1A1TA0A578 MTND4P33-201ENST00000556706 766 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms