Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL136164.3-201ENST00000624429 3978 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 MAPK10-263ENST00000641052 4307 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 RNU4-39P-201ENST00000362455 127 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 OR13C3-201ENST00000374781 1108 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 MIR921-201ENST00000401133 56 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 Z74021.1-201ENST00000423610 407 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 RPL21P43-201ENST00000425440 472 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 FAR1P1-201ENST00000427163 934 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 RPL34P6-201ENST00000432390 345 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL049745.1-201ENST00000433953 286 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 SNRPFP2-201ENST00000440710 251 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 MTND5P8-201ENST00000449817 1083 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL513533.1-201ENST00000453728 415 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 SCARNA10-201ENST00000459255 330 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC006967.1-201ENST00000467608 589 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC007016.1-201ENST00000512110 244 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL671862.1-201ENST00000515851 349 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 RN7SKP46-201ENST00000515942 234 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC008126.1-201ENST00000549019 480 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 COX6CP4-201ENST00000605798 228 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC074276.2-201ENST00000619891 348 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC245100.2-201ENST00000454544 1679 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 HSPA8P14-201ENST00000552265 1805 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 Z95331.1-201ENST00000623075 23112 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 MAPK10-304ENST00000641341 3984 ntBASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRBV5-4A0A0C4DH59 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL035419.1-201ENST00000397037 564 ntBASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL121878.1-201ENST00000418638 859 ntBASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 MTND4P15-201ENST00000437913 1033 ntBASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 ISCUP1-201ENST00000454451 448 ntBASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 MTND4LP2-201ENST00000502312 285 ntBASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.59□□□□□ -1.67
TRBV5-4A0A0C4DH59 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms