Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AL133477.1-201ENST00000457472 514 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 PNPLA4P1-201ENST00000458328 305 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 NDUFA5P9-201ENST00000472609 340 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 TCP11X3P-202ENST00000514289 1254 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 RNA5SP400-201ENST00000517155 111 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AC112191.2-201ENST00000522428 333 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 MTND2P26-201ENST00000528255 1029 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 PDCL2P2-201ENST00000533651 189 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AC010547.6-201ENST00000571789 193 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AC019322.1-201ENST00000571869 389 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AC011453.2-201ENST00000603737 729 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AL512624.1-201ENST00000613638 469 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AC069234.4-201ENST00000621276 412 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 OR8B1P-202ENST00000641132 1178 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AL359955.1-201ENST00000455242 3275 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 RN7SKP128-201ENST00000364270 303 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 RNU6-304P-201ENST00000364855 107 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC006960.1-201ENST00000419980 153 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 BX323845.3-201ENST00000428215 527 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AL365220.1-201ENST00000432923 399 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 PPIAP17-201ENST00000438507 471 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 BMS1P10-201ENST00000443754 1120 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 YWHAQP9-201ENST00000445891 512 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 NPM1P19-201ENST00000450070 712 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 RPL37P3-201ENST00000456825 293 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC010468.1-201ENST00000461022 817 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 PRDX3P4-201ENST00000470828 747 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC083795.1-201ENST00000491760 320 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC104971.1-201ENST00000495117 578 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC008945.1-201ENST00000505144 499 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 SNORA70.20-201ENST00000516848 126 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 CYCSP22-201ENST00000517555 339 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC020937.1-201ENST00000519677 1013 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 OR6M2P-201ENST00000529831 871 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AP000619.3-201ENST00000535634 1127 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 SNORD95-201ENST00000579879 68 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AP003392.5-201ENST00000607857 415 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AL360219.1-201ENST00000610230 366 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 VIS1.1-201ENST00000610517 203 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC107075.1-201ENST00000613695 314 ntBASIC5.74□□□□□ -1.49
PCDHGA3Q9Y5H0 AC105227.2-201ENST00000615075 605 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms