Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 OR5P1P-201ENST00000299512 925 ntBASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 Y_RNA.333-201ENST00000365274 102 ntBASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 UBBP2-201ENST00000376781 231 ntBASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 AL022722.2-201ENST00000402519 180 ntBASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 AC041039.1-201ENST00000485656 536 ntBASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 PPP1R11P1-201ENST00000486095 376 ntBASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 AC140479.6-201ENST00000633535 357 ntBASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 AC108467.2-201ENST00000617640 1597 ntBASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SHANK2Q9UPX8 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 MIR133A2-201ENST00000347538 102 ntBASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 SNORA62.3-201ENST00000365110 153 ntBASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 MIR554-201ENST00000384874 96 ntBASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 AC008280.1-201ENST00000418851 412 ntBASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 RPS29P17-201ENST00000430795 166 ntBASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 AL132765.1-201ENST00000434165 553 ntBASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 RPL23AP43-201ENST00000446445 471 ntBASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 RNU1-45P-201ENST00000517191 141 ntBASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 AP000641.1-201ENST00000531988 1639 ntBASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 AL391684.1-202ENST00000641293 1636 ntBASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHANK2Q9UPX8 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 RAB9AP4-201ENST00000415230 609 ntBASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 AL157385.1-201ENST00000446973 268 ntBASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 RN7SL691P-201ENST00000494487 301 ntBASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 BNIP3P19-201ENST00000605397 577 ntBASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 AL133372.1-201ENST00000493565 745 ntBASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 AL161756.2-201ENST00000604597 246 ntBASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 AC015804.1-201ENST00000622935 435 ntBASIC6.79□□□□□ -1.32
SHANK2Q9UPX8 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK2Q9UPX8 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK2Q9UPX8 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK2Q9UPX8 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.78□□□□□ -1.32
SHANK2Q9UPX8 AC104623.2-202ENST00000623477 4002 ntBASIC6.78□□□□□ -1.32
SHANK2Q9UPX8 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK2Q9UPX8 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK2Q9UPX8 DNM1P47-203ENST00000571780 12667 ntBASIC6.78□□□□□ -1.32
SHANK2Q9UPX8 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK2Q9UPX8 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHANK2Q9UPX8 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.78□□□□□ -1.32
SHANK2Q9UPX8 AL359922.3-201ENST00000624779 1670 ntBASIC6.78□□□□□ -1.32
SHANK2Q9UPX8 RNA5SP366-201ENST00000365454 123 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms