Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AL137072.1-201ENST00000603444 466 ntBASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 AL121932.1-201ENST00000605542 214 ntBASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLIP2Q9UDT6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 CUL4AP1-201ENST00000514750 1863 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AL672167.1-205ENST00000641112 3080 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AC010928.1-201ENST00000592477 1447 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 EIF4A1P1-201ENST00000420241 934 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AL450263.2-201ENST00000439400 589 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AL138878.2-201ENST00000440581 1241 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AC006463.2-201ENST00000473326 348 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AC016687.1-201ENST00000482574 353 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AP001960.1-201ENST00000506494 658 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 ENPP7P9-201ENST00000514456 627 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 HIGD1AP5-201ENST00000529959 259 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 OR5AN2P-201ENST00000534535 896 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AC005868.1-201ENST00000536421 331 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AC025423.2-201ENST00000537570 439 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 AP005212.4-201ENST00000614206 710 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 MFSD8-216ENST00000641147 4009 ntBASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
CLIP2Q9UDT6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 RBPJP2-201ENST00000618187 1444 ntBASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 RNU6-729P-201ENST00000384399 107 ntBASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 MIR298-201ENST00000401212 88 ntBASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 BX510359.2-201ENST00000417920 305 ntBASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 AL645608.4-201ENST00000423619 154 ntBASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 AC010326.1-201ENST00000462726 602 ntBASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 AC090686.1-201ENST00000481577 749 ntBASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 SCARNA22-201ENST00000503991 125 ntBASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 IGKV1-32-201ENST00000519290 311 ntBASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 AP005901.4-201ENST00000577336 569 ntBASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 SNORA74C-1-201ENST00000580726 201 ntBASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 AC098935.2-201ENST00000604222 466 ntBASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 AP000346.3-201ENST00000622821 210 ntBASIC5.65□□□□□ -1.5
CLIP2Q9UDT6 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.65□□□□□ -1.51
CLIP2Q9UDT6 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLIP2Q9UDT6 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms