Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 RNA5SP46-201ENST00000362370 120 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 Y_RNA.472-201ENST00000384322 102 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 MTCO1P56-201ENST00000401674 224 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 RPS6P23-201ENST00000413224 722 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 SDHDP6-201ENST00000414693 480 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 RNGTTP1-201ENST00000420965 728 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 EEF1A1P39-201ENST00000440791 250 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AL391987.1-201ENST00000441025 200 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 RPS7P5-201ENST00000441482 581 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 YWHAEP1-201ENST00000453697 763 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AL139824.2-201ENST00000458731 1095 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 RPS3AP15-201ENST00000483874 781 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AL035404.1-201ENST00000497982 568 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 IGBP1P5-201ENST00000507524 1000 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 PRELID3BP5-201ENST00000508612 460 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 MTCO3P15-201ENST00000526563 574 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 LRRC34P1-201ENST00000542742 915 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AC090312.2-201ENST00000582687 378 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AC023509.5-201ENST00000617434 807 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 AP005432.1-201ENST00000580891 3485 ntBASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NECTIN3Q9NQS3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC138393.1-206ENST00000540997 1886 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC114786.1-201ENST00000512892 1415 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 MTND4P10-201ENST00000446199 1363 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC011755.1-201ENST00000623763 2049 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 RNU4-51P-201ENST00000364206 140 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 RNA5SP131-201ENST00000365452 119 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 RNU6-77P-201ENST00000410554 91 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 OR2AT2P-201ENST00000413438 905 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AL596448.1-201ENST00000415024 392 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 BMS1P17-202ENST00000416720 316 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 OR2X1P-201ENST00000421144 687 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 OR10T1P-201ENST00000424327 947 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 UBE2V1P5-201ENST00000440070 405 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 CR769776.1-201ENST00000441254 787 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 TCEA1P3-201ENST00000443005 880 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AL589880.1-201ENST00000448271 287 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 MEMO1P4-201ENST00000453590 386 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC005229.2-201ENST00000456995 399 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 RN7SL72P-201ENST00000460697 269 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 RPL21P6-201ENST00000479171 504 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 RPS7P6-201ENST00000485777 579 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC005912.1-201ENST00000495392 255 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 SEPT10P1-201ENST00000517342 1162 ntBASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.32□□□□□ -1.56
NECTIN3Q9NQS3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms