Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 NBPF25P-201ENST00000606775 2019 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
USB1Q9BQ65 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 Y_RNA.252-201ENST00000364556 101 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 COQ3-202ENST00000369240 646 ntTSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 RNU6-444P-201ENST00000383988 108 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 RNU6-601P-201ENST00000384540 107 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AL049697.2-201ENST00000403708 294 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 VDAC1P9-201ENST00000412766 841 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 RPS15AP30-201ENST00000420976 390 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC012065.2-201ENST00000421295 375 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC006450.2-201ENST00000429482 581 ntTSL 2 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 FTH1P10-202ENST00000430907 550 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 Z98752.2-201ENST00000432727 312 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC073109.1-201ENST00000445066 978 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC005840.2-201ENST00000447193 355 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC002486.2-201ENST00000447806 590 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 TVP23CP1-201ENST00000450317 639 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 HMGB1P15-201ENST00000453854 435 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC019084.1-201ENST00000457337 432 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 RPL35AP28-201ENST00000459730 331 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC058823.1-201ENST00000485315 474 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC022415.1-202ENST00000486612 523 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 RN7SL124P-201ENST00000498656 285 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC092436.1-201ENST00000506450 503 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC091849.1-201ENST00000509920 121 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 RNU6-1213P-201ENST00000517075 94 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC087854.1-201ENST00000519706 414 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 MAL2-208ENST00000523307 556 ntTSL 4 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 HSPE1P2-201ENST00000554777 306 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 AL353997.4-201ENST00000586196 166 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC018889.1-201ENST00000605372 397 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 MIR8089-201ENST00000620165 82 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 AC098657.3-201ENST00000620434 263 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
USB1Q9BQ65 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
USB1Q9BQ65 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
USB1Q9BQ65 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
USB1Q9BQ65 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
USB1Q9BQ65 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
USB1Q9BQ65 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.05□□□□□ -1.28
USB1Q9BQ65 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
USB1Q9BQ65 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
USB1Q9BQ65 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
USB1Q9BQ65 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
USB1Q9BQ65 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC018880.1-201ENST00000418898 1319 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 MTND5P28-201ENST00000438005 1594 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 AP003175.1-201ENST00000641383 6658 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms