Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC099535.1-201ENST00000408928 371 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 CCDC58P2-201ENST00000417131 366 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 Z97055.1-201ENST00000419730 712 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 RPL7AP14-201ENST00000424041 802 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AC112492.2-201ENST00000432774 1030 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AC069154.1-201ENST00000432914 542 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 RPL21P110-201ENST00000433345 446 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 DNAJC19P4-201ENST00000440115 345 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 ELOCP10-201ENST00000440624 327 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AC016908.1-201ENST00000442571 1219 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AL512593.1-201ENST00000444758 779 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AC019084.1-201ENST00000457337 432 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 HMGB1P44-201ENST00000508597 572 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 KRT19P6-201ENST00000510983 209 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 RNA5SP206-201ENST00000516703 121 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 RNA5SP441-201ENST00000516809 88 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AC008802.1-201ENST00000519121 791 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 IGHV3-32-201ENST00000519182 355 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 IGHV1-14-201ENST00000523391 241 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 DEFB108A-201ENST00000530110 222 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 DUX4L52-201ENST00000549363 777 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 MIR3154-201ENST00000577829 84 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 SNORA59B-202ENST00000578183 701 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 ELOCP34-201ENST00000604436 327 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AL683813.2-201ENST00000605245 502 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AL008723.3-201ENST00000608926 449 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 MIR6721-201ENST00000617181 87 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AL356596.1-201ENST00000624230 379 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC009779.8-201ENST00000641684 4384 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 ELF2P3-201ENST00000445099 1506 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 RPL21P132-201ENST00000331267 462 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 RNU6-839P-201ENST00000363347 108 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 RNU6-501P-201ENST00000364072 100 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 RNU6-619P-201ENST00000365146 108 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 MIR188-201ENST00000385034 86 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AL157702.1-201ENST00000398764 426 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 RN7SKP56-201ENST00000410513 331 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 U3.43-201ENST00000410734 213 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 OR51A3P-201ENST00000413596 924 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC245052.5-201ENST00000416320 649 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 RPL21P32-201ENST00000419877 477 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 SETP9-201ENST00000423837 832 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 PRUNEP1-201ENST00000425846 705 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC099782.1-201ENST00000425889 474 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 USP9YP18-201ENST00000425912 695 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AL645936.1-201ENST00000441979 518 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 VPS25P1-201ENST00000455691 508 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 ARPC3P2-201ENST00000457786 533 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 RPL12P31-201ENST00000478433 450 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 RN7SL741P-201ENST00000482473 289 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 RN7SL362P-201ENST00000494228 267 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC135352.1-201ENST00000506173 1418 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC010343.2-201ENST00000510162 224 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 AC022034.1-201ENST00000512867 2156 ntBASIC5.95□□□□□ -1.46
PTCHD1Q96NR3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms