Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 BLZF2P-201ENST00000553776 1130 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 AC007225.2-201ENST00000562529 256 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.97□□□□□ -1.45
HPS3Q969F9 AC010245.2-201ENST00000606908 1167 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 AL022394.1-201ENST00000606979 292 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 AC024595.1-201ENST00000623088 387 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 AP003497.2-201ENST00000624220 967 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 LINC01808-202ENST00000641680 1116 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HPS3Q969F9 AL078621.3-201ENST00000623707 2042 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HPS3Q969F9 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HPS3Q969F9 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HPS3Q969F9 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
HPS3Q969F9 AL355578.1-201ENST00000607405 1328 ntBASIC5.97□□□□□ -1.45
HPS3Q969F9 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
HPS3Q969F9 LINC01963-201ENST00000562038 3148 ntBASIC5.96□□□□□ -1.45
HPS3Q969F9 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HPS3Q969F9 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.45
HPS3Q969F9 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
HPS3Q969F9 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
HPS3Q969F9 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS3Q969F9 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS3Q969F9 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS3Q969F9 MIR143-201ENST00000385300 106 ntBASIC5.96□□□□□ -1.46
HPS3Q969F9 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.96□□□□□ -1.46
HPS3Q969F9 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.96□□□□□ -1.46
HPS3Q969F9 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.96□□□□□ -1.46
HPS3Q969F9 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.96□□□□□ -1.46
HPS3Q969F9 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.96□□□□□ -1.46
HPS3Q969F9 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.96□□□□□ -1.46
HPS3Q969F9 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.96□□□□□ -1.46
HPS3Q969F9 AC105399.1-202ENST00000447303 205 ntBASIC5.96□□□□□ -1.46
HPS3Q969F9 ZNF886P-201ENST00000450781 723 ntBASIC5.96□□□□□ -1.46
HPS3Q969F9 RN7SL717P-201ENST00000478343 297 ntBASIC5.96□□□□□ -1.46
HPS3Q969F9 RN7SL547P-201ENST00000490793 290 ntBASIC5.96□□□□□ -1.46
HPS3Q969F9 RN7SL466P-201ENST00000497546 295 ntBASIC5.96□□□□□ -1.46
HPS3Q969F9 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.96□□□□□ -1.46
HPS3Q969F9 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.96□□□□□ -1.46
HPS3Q969F9 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.96□□□□□ -1.46
HPS3Q969F9 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.96□□□□□ -1.46
HPS3Q969F9 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.96□□□□□ -1.46
HPS3Q969F9 RNA5SP362-201ENST00000516048 118 ntBASIC5.96□□□□□ -1.46
HPS3Q969F9 SCARNA16.4-201ENST00000516956 187 ntBASIC5.96□□□□□ -1.46
HPS3Q969F9 AC027308.1-201ENST00000517993 110 ntBASIC5.96□□□□□ -1.46
HPS3Q969F9 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.96□□□□□ -1.46
HPS3Q969F9 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.96□□□□□ -1.46
HPS3Q969F9 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.96□□□□□ -1.46
HPS3Q969F9 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.96□□□□□ -1.46
HPS3Q969F9 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.96□□□□□ -1.46
HPS3Q969F9 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.96□□□□□ -1.46
HPS3Q969F9 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.96□□□□□ -1.46
HPS3Q969F9 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.96□□□□□ -1.46
HPS3Q969F9 CYP2C60P-201ENST00000566088 139 ntBASIC5.96□□□□□ -1.46
HPS3Q969F9 AC015720.2-201ENST00000567709 334 ntBASIC5.96□□□□□ -1.46
HPS3Q969F9 AC002487.1-201ENST00000604565 994 ntBASIC5.96□□□□□ -1.46
HPS3Q969F9 AC013468.1-201ENST00000608680 598 ntBASIC5.96□□□□□ -1.46
HPS3Q969F9 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS3Q969F9 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HPS3Q969F9 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS3Q969F9 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS3Q969F9 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.96□□□□□ -1.46
HPS3Q969F9 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.96□□□□□ -1.46
HPS3Q969F9 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS3Q969F9 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS3Q969F9 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS3Q969F9 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS3Q969F9 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.96□□□□□ -1.46
HPS3Q969F9 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HPS3Q969F9 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 ENSAP3-201ENST00000312710 333 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 RNA5SP319-201ENST00000362768 119 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 RNA5SP335-201ENST00000363817 110 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 RNU6-224P-201ENST00000384055 107 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.95□□□□□ -1.46
HPS3Q969F9 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.95□□□□□ -1.46
HPS3Q969F9 AL513325.1-201ENST00000417716 1034 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.95□□□□□ -1.46
HPS3Q969F9 CETN4P-201ENST00000432407 469 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 RPL7P29-201ENST00000437151 728 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.95□□□□□ -1.46
HPS3Q969F9 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 Z73417.1-201ENST00000447373 778 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.95□□□□□ -1.46
HPS3Q969F9 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.95□□□□□ -1.46
HPS3Q969F9 AC108161.1-201ENST00000461060 402 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 AC110749.1-201ENST00000462007 357 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 RN7SL184P-201ENST00000488308 297 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms