Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
SHROOM3Q8TF72 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 OR1H1P-201ENST00000448731 937 ntBASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 OR52A4P-201ENST00000472867 958 ntBASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 PGBD4P4-201ENST00000509673 613 ntBASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 AC015871.5-202ENST00000623252 701 ntBASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM3Q8TF72 AL136164.3-201ENST00000624429 3978 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 snoU13.22-201ENST00000459428 104 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 AC091868.1-201ENST00000508746 304 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 OR5M2P-201ENST00000529003 936 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 LSM3P2-201ENST00000551246 273 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 AC005191.1-201ENST00000603950 358 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 MIR8069-1-201ENST00000616627 86 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 AC234782.5-201ENST00000617723 324 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 MIR8069-2-201ENST00000621412 86 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 AP000843.1-201ENST00000624880 701 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 NOL8P1-201ENST00000508336 3529 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 AC097461.1-201ENST00000568928 2821 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 RNU1-63P-201ENST00000383902 164 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 RPL32P23-201ENST00000397237 405 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 BX510359.2-201ENST00000417920 305 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 RPL23AP83-201ENST00000434984 473 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 AC104651.2-201ENST00000447549 528 ntBASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
SHROOM3Q8TF72 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 Z98755.1-201ENST00000407015 1384 ntBASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 RPL21P43-201ENST00000425440 472 ntBASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 AP001324.1-201ENST00000428553 399 ntBASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 AL359265.2-201ENST00000434367 631 ntBASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 Z95152.1-201ENST00000453556 656 ntBASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 AC020593.1-201ENST00000507399 299 ntBASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 RNU6-513P-201ENST00000516104 104 ntBASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 BUD31P1-201ENST00000521828 359 ntBASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 AP001781.1-201ENST00000530977 207 ntBASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 AC087477.6-201ENST00000559595 843 ntBASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 AC017100.2-201ENST00000584628 355 ntBASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 AL031119.1-201ENST00000404707 1879 ntBASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms