Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 FKBP1BP1-201ENST00000553366 325 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 AC123786.2-201ENST00000603459 275 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 IMMP1LP1-201ENST00000605170 488 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 AC010424.2-201ENST00000607594 443 ntBASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
CLHC1Q8NHS4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CLHC1Q8NHS4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.59□□□□□ -1.68
CLHC1Q8NHS4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.68
CLHC1Q8NHS4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AL445437.1-201ENST00000623157 3087 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AL590763.1-201ENST00000398297 1545 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 MTCO1P11-201ENST00000429111 1528 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 U8.4-201ENST00000363626 134 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 RPS24P12-201ENST00000402084 394 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 ARL4AP5-201ENST00000404372 599 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AL080315.1-201ENST00000406055 466 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 RN7SKP125-201ENST00000410481 302 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 RPL7P11-201ENST00000437586 658 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AC092647.3-201ENST00000443044 633 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AC005532.2-201ENST00000467154 373 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 RPS4XP18-201ENST00000495480 763 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AC140172.1-201ENST00000502928 141 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 ARL4AP1-201ENST00000503220 705 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 MORF4L1P3-201ENST00000525966 950 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AP000919.1-201ENST00000582850 985 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AL353662.3-201ENST00000625131 237 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AC006453.5-201ENST00000636451 619 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AC092079.1-201ENST00000558620 1985 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 AC009313.2-201ENST00000417893 1941 ntBASIC4.58□□□□□ -1.68
CLHC1Q8NHS4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 RNU4-7P-201ENST00000364758 141 ntBASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 AC010733.1-201ENST00000451515 401 ntBASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 IFNWP4-201ENST00000453148 294 ntBASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 AC090142.2-201ENST00000483263 416 ntBASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 RPL37AP8-201ENST00000494116 276 ntBASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 AC011453.2-201ENST00000603737 729 ntBASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 AL121932.1-201ENST00000605542 214 ntBASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 AC116447.1-201ENST00000613153 453 ntBASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 MIR6729-201ENST00000618194 65 ntBASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 TLK1P1-201ENST00000456760 2440 ntBASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 AL136164.3-201ENST00000624429 3978 ntBASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLHC1Q8NHS4 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 C4BPAP1-201ENST00000415474 1893 ntBASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 RNU4-4P-201ENST00000364588 130 ntBASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 SNORD96B-201ENST00000386148 79 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms