Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 ANKRD36P1-201ENST00000344424 659 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 RNU6-224P-201ENST00000384055 107 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AL009179.1-201ENST00000406085 265 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 SNORA11.3-201ENST00000408471 128 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AL390774.1-201ENST00000411924 246 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AL133173.1-201ENST00000423458 397 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AL593851.1-201ENST00000426171 157 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 MTATP6P13-201ENST00000438531 667 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 FGF7P5-201ENST00000441829 291 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VRK3Q8IV63 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 MRPL35P2-201ENST00000448009 511 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AL627224.1-201ENST00000448334 444 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AL450023.1-201ENST00000450868 751 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 SYPL1P1-201ENST00000473622 768 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 RN7SL583P-201ENST00000475692 287 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 SUMO1P1-201ENST00000497904 306 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AK4P6-201ENST00000505168 528 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC008549.1-201ENST00000512900 643 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC119751.1-201ENST00000513357 765 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 RNU6-759P-201ENST00000516740 103 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC104417.1-201ENST00000523974 751 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC008147.3-201ENST00000548666 354 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 MRPS21P7-201ENST00000566937 238 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 MIR4789-201ENST00000577469 82 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC022662.1-201ENST00000580252 331 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC022069.1-201ENST00000582910 658 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC025857.2-201ENST00000602711 238 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 DUXAP11-201ENST00000603858 526 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AL163642.2-201ENST00000604722 1019 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC010738.1-201ENST00000604970 987 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC069234.5-201ENST00000611056 416 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 RNA5SP440-201ENST00000612665 119 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC008115.3-201ENST00000614874 549 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 RMST_10.1-201ENST00000616309 154 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 SNORA11.6-201ENST00000619030 128 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 VN1R7P-201ENST00000619242 903 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AL590240.3-201ENST00000621416 943 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC010608.2-201ENST00000624830 470 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC079776.5-201ENST00000641920 211 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC140134.1-201ENST00000511830 3544 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 AL355834.1-201ENST00000556602 3965 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VRK3Q8IV63 OR4F13P-202ENST00000560066 2054 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VRK3Q8IV63 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
VRK3Q8IV63 AC114774.1-201ENST00000507410 1770 ntBASIC5.47□□□□□ -1.53
VRK3Q8IV63 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.47□□□□□ -1.53
VRK3Q8IV63 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
VRK3Q8IV63 CASC19-281ENST00000642118 1554 ntBASIC5.46□□□□□ -1.53
VRK3Q8IV63 AC004656.1-201ENST00000568479 4951 ntBASIC5.46□□□□□ -1.53
VRK3Q8IV63 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
VRK3Q8IV63 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
VRK3Q8IV63 AC006206.1-201ENST00000544842 3387 ntBASIC5.46□□□□□ -1.53
VRK3Q8IV63 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.46□□□□□ -1.53
VRK3Q8IV63 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
VRK3Q8IV63 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VRK3Q8IV63 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.46□□□□□ -1.54
VRK3Q8IV63 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VRK3Q8IV63 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.46□□□□□ -1.54
VRK3Q8IV63 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VRK3Q8IV63 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.46□□□□□ -1.54
VRK3Q8IV63 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VRK3Q8IV63 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.46□□□□□ -1.54
VRK3Q8IV63 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VRK3Q8IV63 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VRK3Q8IV63 U6.112-201ENST00000384129 70 ntBASIC5.46□□□□□ -1.54
VRK3Q8IV63 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
VRK3Q8IV63 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VRK3Q8IV63 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
VRK3Q8IV63 ATP5F1P3-201ENST00000397213 657 ntBASIC5.46□□□□□ -1.54
VRK3Q8IV63 ERHP2-201ENST00000402323 299 ntBASIC5.46□□□□□ -1.54
VRK3Q8IV63 AL590084.1-201ENST00000407885 387 ntBASIC5.46□□□□□ -1.54
VRK3Q8IV63 RPS7P9-201ENST00000414704 586 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms