Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 AC093799.2-201ENST00000610062 578 ntBASIC4.61□□□□□ -1.67
CHMP1BQ7LBR1 AC080188.3-201ENST00000624842 748 ntBASIC4.61□□□□□ -1.67
CHMP1BQ7LBR1 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHMP1BQ7LBR1 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHMP1BQ7LBR1 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHMP1BQ7LBR1 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHMP1BQ7LBR1 SOCS5P3-201ENST00000425115 1576 ntBASIC4.61□□□□□ -1.67
CHMP1BQ7LBR1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.61□□□□□ -1.67
CHMP1BQ7LBR1 MTND5P23-201ENST00000430812 1655 ntBASIC4.61□□□□□ -1.67
CHMP1BQ7LBR1 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CHMP1BQ7LBR1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC107068.1-201ENST00000563286 4218 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC010132.2-201ENST00000295493 1043 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AL390316.1-201ENST00000406279 553 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 RPL36AP10-201ENST00000421785 322 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 ZNF965P-201ENST00000432501 817 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 MTND2P21-201ENST00000436242 1042 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC245517.2-201ENST00000442890 346 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC239798.3-201ENST00000454459 408 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 MTND2P6-201ENST00000455337 1030 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC020779.1-201ENST00000478757 796 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 HMGB1P3-201ENST00000502802 616 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC016550.3-201ENST00000515706 767 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 RNA5SP464-201ENST00000516251 108 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AP000859.1-201ENST00000525536 307 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC019227.1-201ENST00000526902 510 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC027369.5-201ENST00000533838 755 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 NOP56P3-201ENST00000549457 385 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 CR383656.14-201ENST00000551951 406 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC091905.4-201ENST00000623432 202 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC073869.10-201ENST00000642016 354 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC000123.3-201ENST00000624029 4975 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 AC112255.1-201ENST00000624070 2493 ntBASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP1BQ7LBR1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 GJA6P-201ENST00000415117 1042 ntBASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 ARL2BPP3-201ENST00000421226 480 ntBASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 AC007394.1-201ENST00000421941 531 ntBASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 EI24P4-201ENST00000423683 1078 ntBASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 RBMY2QP-201ENST00000429799 1147 ntBASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 VN1R54P-201ENST00000435210 1049 ntBASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 RPL12P3-201ENST00000440080 396 ntBASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 AC073648.4-201ENST00000442655 781 ntBASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 NOP56P2-201ENST00000447491 769 ntBASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 BX842559.2-201ENST00000451418 605 ntBASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 CABYRP1-201ENST00000465493 1045 ntBASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 AC008410.1-201ENST00000483777 339 ntBASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 NDUFA5P12-201ENST00000503796 343 ntBASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 HMGB3P16-201ENST00000508037 287 ntBASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 COX6B1P5-201ENST00000509843 249 ntBASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 AC093770.1-201ENST00000511559 571 ntBASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.59□□□□□ -1.67
CHMP1BQ7LBR1 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms