Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 ZFRP1-201ENST00000457579 2970 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 AC008725.1-201ENST00000605123 2263 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 AC103591.2-201ENST00000265259 766 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 U3.2-201ENST00000362981 210 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 MIR513A2-201ENST00000385249 127 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 OR2AM1P-201ENST00000422137 422 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 Z74021.1-201ENST00000423610 407 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 DYNLL1P7-201ENST00000429273 258 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 HSPE1P27-201ENST00000430808 296 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 AC092647.2-201ENST00000452998 253 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 PPIAP19-201ENST00000486414 492 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 AC108693.1-201ENST00000496068 432 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 AL049839.1-201ENST00000556151 657 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 RPL7P50-201ENST00000600588 727 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 AL645927.2-201ENST00000618350 349 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 AP006248.2-201ENST00000623309 592 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 CR381572.2-201ENST00000624852 397 ntBASIC4.22□□□□□ -1.73
CCDC58Q4VC31 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC58Q4VC31 THAP12P4-201ENST00000528321 2266 ntBASIC4.21□□□□□ -1.73
CCDC58Q4VC31 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC58Q4VC31 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC58Q4VC31 HSPD1P14-201ENST00000432666 1618 ntBASIC4.21□□□□□ -1.73
CCDC58Q4VC31 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 RN7SKP44-201ENST00000363602 316 ntBASIC4.21□□□□□ -1.74
CCDC58Q4VC31 AL031985.1-201ENST00000392713 418 ntBASIC4.21□□□□□ -1.74
CCDC58Q4VC31 RNA5SP178-201ENST00000410380 128 ntBASIC4.21□□□□□ -1.74
CCDC58Q4VC31 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.21□□□□□ -1.74
CCDC58Q4VC31 LINC00993-201ENST00000420453 540 ntBASIC4.21□□□□□ -1.74
CCDC58Q4VC31 CYP4F29P-201ENST00000420685 446 ntBASIC4.21□□□□□ -1.74
CCDC58Q4VC31 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 AC099063.2-201ENST00000446360 662 ntBASIC4.21□□□□□ -1.74
CCDC58Q4VC31 S100A11P1-201ENST00000477525 312 ntBASIC4.21□□□□□ -1.74
CCDC58Q4VC31 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 IGLV3-26-201ENST00000520756 302 ntBASIC4.21□□□□□ -1.74
CCDC58Q4VC31 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 AC090515.3-201ENST00000560431 315 ntBASIC4.21□□□□□ -1.74
CCDC58Q4VC31 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 AC023509.5-201ENST00000617434 807 ntBASIC4.21□□□□□ -1.74
CCDC58Q4VC31 AL357153.4-201ENST00000620487 1016 ntBASIC4.21□□□□□ -1.74
CCDC58Q4VC31 AL359757.1-201ENST00000623176 255 ntBASIC4.21□□□□□ -1.74
CCDC58Q4VC31 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC58Q4VC31 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms