Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 CYP4F29P-201ENST00000420685 446 ntBASIC4.87□□□□□ -1.63
CBX1P83916 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CBX1P83916 AC234779.1-201ENST00000425910 285 ntBASIC4.87□□□□□ -1.63
CBX1P83916 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.87□□□□□ -1.63
CBX1P83916 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.87□□□□□ -1.63
CBX1P83916 RPL7P4-203ENST00000430239 730 ntBASIC4.87□□□□□ -1.63
CBX1P83916 RPL7P28-201ENST00000437739 740 ntBASIC4.87□□□□□ -1.63
CBX1P83916 AL512637.1-201ENST00000439523 1231 ntBASIC4.87□□□□□ -1.63
CBX1P83916 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.87□□□□□ -1.63
CBX1P83916 HMGB1P16-201ENST00000447155 540 ntBASIC4.87□□□□□ -1.63
CBX1P83916 AC105399.1-202ENST00000447303 205 ntBASIC4.87□□□□□ -1.63
CBX1P83916 MTND2P25-201ENST00000449028 610 ntBASIC4.87□□□□□ -1.63
CBX1P83916 NPM1P39-201ENST00000449818 867 ntBASIC4.87□□□□□ -1.63
CBX1P83916 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.87□□□□□ -1.63
CBX1P83916 AC007386.1-201ENST00000455212 582 ntBASIC4.87□□□□□ -1.63
CBX1P83916 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.87□□□□□ -1.63
CBX1P83916 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
CBX1P83916 LSM3P4-201ENST00000502948 309 ntBASIC4.87□□□□□ -1.63
CBX1P83916 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.87□□□□□ -1.63
CBX1P83916 UBTFL9-201ENST00000534504 1148 ntBASIC4.87□□□□□ -1.63
CBX1P83916 AC006512.2-201ENST00000543250 486 ntBASIC4.87□□□□□ -1.63
CBX1P83916 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CBX1P83916 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CBX1P83916 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.87□□□□□ -1.63
CBX1P83916 AC027281.1-201ENST00000574178 758 ntBASIC4.87□□□□□ -1.63
CBX1P83916 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.87□□□□□ -1.63
CBX1P83916 AC007620.3-201ENST00000608131 497 ntBASIC4.87□□□□□ -1.63
CBX1P83916 AL359091.2-201ENST00000609303 556 ntBASIC4.87□□□□□ -1.63
CBX1P83916 RPSAP73-201ENST00000614820 330 ntBASIC4.87□□□□□ -1.63
CBX1P83916 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.87□□□□□ -1.63
CBX1P83916 AL591926.1-201ENST00000620542 217 ntBASIC4.87□□□□□ -1.63
CBX1P83916 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CBX1P83916 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CBX1P83916 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.87□□□□□ -1.63
CBX1P83916 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CBX1P83916 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CBX1P83916 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CBX1P83916 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.87□□□□□ -1.63
CBX1P83916 CASC19-281ENST00000642118 1554 ntBASIC4.87□□□□□ -1.63
CBX1P83916 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CBX1P83916 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.86□□□□□ -1.63
CBX1P83916 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CBX1P83916 U3.3-201ENST00000362986 216 ntBASIC4.86□□□□□ -1.63
CBX1P83916 RNA5SP394-201ENST00000364216 119 ntBASIC4.86□□□□□ -1.63
CBX1P83916 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CBX1P83916 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.86□□□□□ -1.63
CBX1P83916 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CBX1P83916 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CBX1P83916 MIR621-201ENST00000384919 96 ntBASIC4.86□□□□□ -1.63
CBX1P83916 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CBX1P83916 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CBX1P83916 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.86□□□□□ -1.63
CBX1P83916 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CBX1P83916 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.86□□□□□ -1.63
CBX1P83916 RPL24P2-201ENST00000421023 475 ntBASIC4.86□□□□□ -1.63
CBX1P83916 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.86□□□□□ -1.63
CBX1P83916 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.86□□□□□ -1.63
CBX1P83916 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.86□□□□□ -1.63
CBX1P83916 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CBX1P83916 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.86□□□□□ -1.63
CBX1P83916 AP000936.3-201ENST00000438127 255 ntBASIC4.86□□□□□ -1.63
CBX1P83916 RPS29P9-201ENST00000440360 171 ntBASIC4.86□□□□□ -1.63
CBX1P83916 AC019185.1-201ENST00000442718 389 ntBASIC4.86□□□□□ -1.63
CBX1P83916 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.86□□□□□ -1.63
CBX1P83916 AL163193.1-201ENST00000444895 788 ntBASIC4.86□□□□□ -1.63
CBX1P83916 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.86□□□□□ -1.63
CBX1P83916 UBA52P3-201ENST00000491303 382 ntBASIC4.86□□□□□ -1.63
CBX1P83916 Y_RNA.719-201ENST00000517156 106 ntBASIC4.86□□□□□ -1.63
CBX1P83916 OR5M7P-201ENST00000526140 972 ntBASIC4.86□□□□□ -1.63
CBX1P83916 AC092851.1-201ENST00000535964 478 ntBASIC4.86□□□□□ -1.63
CBX1P83916 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.86□□□□□ -1.63
CBX1P83916 AC008147.3-201ENST00000548666 354 ntBASIC4.86□□□□□ -1.63
CBX1P83916 IGBP1P1-201ENST00000554337 1009 ntBASIC4.86□□□□□ -1.63
CBX1P83916 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.86□□□□□ -1.63
CBX1P83916 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.86□□□□□ -1.63
CBX1P83916 MIR4271-201ENST00000582451 67 ntBASIC4.86□□□□□ -1.63
CBX1P83916 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.86□□□□□ -1.63
CBX1P83916 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CBX1P83916 SNX6P1-201ENST00000601728 1224 ntBASIC4.86□□□□□ -1.63
CBX1P83916 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.86□□□□□ -1.63
CBX1P83916 AL356274.1-201ENST00000617064 410 ntBASIC4.86□□□□□ -1.63
CBX1P83916 AC103858.2-201ENST00000621471 543 ntBASIC4.86□□□□□ -1.63
CBX1P83916 SAMMSON-209ENST00000641222 1100 ntBASIC4.86□□□□□ -1.63
CBX1P83916 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CBX1P83916 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CBX1P83916 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CBX1P83916 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.86□□□□□ -1.63
CBX1P83916 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.86□□□□□ -1.63
CBX1P83916 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CBX1P83916 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CBX1P83916 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.85□□□□□ -1.63
CBX1P83916 ATP5HP3-201ENST00000396994 486 ntBASIC4.85□□□□□ -1.63
CBX1P83916 CXADRP1-201ENST00000398098 1095 ntBASIC4.85□□□□□ -1.63
CBX1P83916 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.85□□□□□ -1.63
CBX1P83916 AC092647.1-201ENST00000420654 287 ntBASIC4.85□□□□□ -1.63
CBX1P83916 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.85□□□□□ -1.63
CBX1P83916 GLUD1P9-201ENST00000420997 1173 ntBASIC4.85□□□□□ -1.63
CBX1P83916 AC002069.1-201ENST00000429649 1159 ntBASIC4.85□□□□□ -1.63
CBX1P83916 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.85□□□□□ -1.63
CBX1P83916 AC069277.2-201ENST00000454211 432 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms