Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC073909.1-201ENST00000447112 999 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 CDY23P-201ENST00000451661 1014 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CX3CL1P78423 RPL7AP10-201ENST00000481016 791 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 RN7SL273P-201ENST00000481561 299 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.35□□□□□ -1.71
CX3CL1P78423 AC021193.1-201ENST00000511607 420 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CX3CL1P78423 RNU6-347P-201ENST00000516658 105 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.35□□□□□ -1.71
CX3CL1P78423 AP001207.2-201ENST00000519490 539 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.35□□□□□ -1.71
CX3CL1P78423 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.35□□□□□ -1.71
CX3CL1P78423 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.35□□□□□ -1.71
CX3CL1P78423 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.35□□□□□ -1.71
CX3CL1P78423 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.35□□□□□ -1.71
CX3CL1P78423 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.35□□□□□ -1.71
CX3CL1P78423 MIR4509-3-201ENST00000578671 94 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 MIR4472-2-201ENST00000582069 67 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 MIR4509-2-201ENST00000583920 94 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.35□□□□□ -1.71
CX3CL1P78423 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.35□□□□□ -1.71
CX3CL1P78423 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.35□□□□□ -1.71
CX3CL1P78423 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.35□□□□□ -1.71
CX3CL1P78423 MIR4509-1-201ENST00000618224 94 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 AC139769.3-201ENST00000618383 175 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 uc_338.7-201ENST00000621834 124 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CX3CL1P78423 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.35□□□□□ -1.71
CX3CL1P78423 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CX3CL1P78423 THAP12P5-201ENST00000405864 2275 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CX3CL1P78423 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.35□□□□□ -1.71
CX3CL1P78423 AC100871.1-201ENST00000507871 1456 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CX3CL1P78423 AC073055.1-201ENST00000456901 1621 ntBASIC4.35□□□□□ -1.71
CX3CL1P78423 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
CX3CL1P78423 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.71
CX3CL1P78423 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CX3CL1P78423 AC006206.1-201ENST00000544842 3387 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
CX3CL1P78423 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CX3CL1P78423 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
CX3CL1P78423 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CX3CL1P78423 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.34□□□□□ -1.71
CX3CL1P78423 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.34□□□□□ -1.71
CX3CL1P78423 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CX3CL1P78423 RNA5SP319-201ENST00000362768 119 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 RNU6-304P-201ENST00000364855 107 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CX3CL1P78423 RNU6-317P-201ENST00000384031 107 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 RNU1-74P-201ENST00000384108 171 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 SNORA17A-201ENST00000391185 133 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CX3CL1P78423 MCTS2P-201ENST00000394552 546 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 RPL7P27-201ENST00000403775 720 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 RN7SKP293-201ENST00000411389 296 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 NPM1P40-201ENST00000412758 733 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CL1P78423 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CL1P78423 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CL1P78423 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CL1P78423 MTCO1P53-201ENST00000441633 699 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 AL050341.1-201ENST00000447743 313 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CL1P78423 AL935212.3-201ENST00000450729 284 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 DUXAP8-207ENST00000456786 622 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 RN7SL51P-201ENST00000468230 285 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 TRBV8-2-201ENST00000475637 270 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 RPS12P31-201ENST00000491419 398 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CL1P78423 AC021106.1-201ENST00000509020 1058 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 AC091912.1-201ENST00000511351 248 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 MTND6P2-201ENST00000512226 524 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CL1P78423 HMGB1P1-201ENST00000522557 636 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CL1P78423 AC027544.3-201ENST00000535082 757 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 AC006518.2-201ENST00000542513 940 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CL1P78423 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.34□□□□□ -1.71
CX3CL1P78423 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CL1P78423 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CL1P78423 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CL1P78423 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 AC023824.3-201ENST00000569003 562 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CL1P78423 MIR4310-201ENST00000582950 57 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CL1P78423 AC006272.2-201ENST00000594725 163 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 AC009237.13-201ENST00000603193 276 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 Z82195.1-201ENST00000604558 398 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 AC013468.1-201ENST00000608680 598 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 DUXAP10-204ENST00000612052 616 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.34□□□□□ -1.71
CX3CL1P78423 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.34□□□□□ -1.71
CX3CL1P78423 SNORA17.5-201ENST00000630429 132 ntBASIC4.34□□□□□ -1.71
CX3CL1P78423 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms