Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RBPJP2-201ENST00000618187 1444 ntBASIC4.17□□□□□ -1.74
LMO4P61968 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
LMO4P61968 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LMO4P61968 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.17□□□□□ -1.74
LMO4P61968 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.17□□□□□ -1.74
LMO4P61968 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.17□□□□□ -1.74
LMO4P61968 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
LMO4P61968 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LMO4P61968 SDAD1P1-202ENST00000524156 2051 ntBASIC4.17□□□□□ -1.74
LMO4P61968 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.17□□□□□ -1.74
LMO4P61968 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
LMO4P61968 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMO4P61968 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
LMO4P61968 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.16□□□□□ -1.74
LMO4P61968 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.16□□□□□ -1.74
LMO4P61968 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMO4P61968 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.16□□□□□ -1.74
LMO4P61968 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
LMO4P61968 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
LMO4P61968 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.16□□□□□ -1.74
LMO4P61968 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
LMO4P61968 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMO4P61968 SNORA27.3-201ENST00000364937 134 ntBASIC4.16□□□□□ -1.74
LMO4P61968 RNU6-609P-201ENST00000365459 107 ntBASIC4.16□□□□□ -1.74
LMO4P61968 ANAPC10P1-201ENST00000395991 556 ntBASIC4.16□□□□□ -1.74
LMO4P61968 ATP5HP3-201ENST00000396994 486 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AL136131.1-201ENST00000406079 803 ntBASIC4.16□□□□□ -1.74
LMO4P61968 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.16□□□□□ -1.74
LMO4P61968 RPL26P29-201ENST00000415623 438 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.16□□□□□ -1.74
LMO4P61968 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.16□□□□□ -1.74
LMO4P61968 AC007559.1-201ENST00000428736 355 ntBASIC4.16□□□□□ -1.74
LMO4P61968 SETP8-201ENST00000435341 628 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AC093716.1-201ENST00000435923 377 ntBASIC4.16□□□□□ -1.74
LMO4P61968 MTCYBP29-201ENST00000436327 1006 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.16□□□□□ -1.74
LMO4P61968 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.16□□□□□ -1.74
LMO4P61968 RRM2P4-201ENST00000441721 562 ntBASIC4.16□□□□□ -1.74
LMO4P61968 CEACAMP9-201ENST00000442990 513 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.16□□□□□ -1.74
LMO4P61968 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.16□□□□□ -1.74
LMO4P61968 GAPDHP14-201ENST00000450472 937 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.16□□□□□ -1.74
LMO4P61968 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.16□□□□□ -1.74
LMO4P61968 AC063943.1-201ENST00000465434 453 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.16□□□□□ -1.74
LMO4P61968 NAMPTP2-201ENST00000505629 1115 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AC108157.1-201ENST00000510511 539 ntBASIC4.16□□□□□ -1.74
LMO4P61968 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.16□□□□□ -1.74
LMO4P61968 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.16□□□□□ -1.74
LMO4P61968 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.16□□□□□ -1.74
LMO4P61968 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.16□□□□□ -1.74
LMO4P61968 AC063949.1-201ENST00000552900 865 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.16□□□□□ -1.74
LMO4P61968 CKS1BP1-201ENST00000555221 240 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.16□□□□□ -1.74
LMO4P61968 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.16□□□□□ -1.74
LMO4P61968 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.16□□□□□ -1.74
LMO4P61968 RN7SL290P-201ENST00000578661 300 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.16□□□□□ -1.74
LMO4P61968 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.16□□□□□ -1.74
LMO4P61968 MIMT1-201ENST00000597105 1050 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AC098935.2-201ENST00000604222 466 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AC005377.1-201ENST00000605126 456 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AL121652.1-201ENST00000608851 448 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.16□□□□□ -1.74
LMO4P61968 AC009464.1-201ENST00000615731 469 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AC009159.2-201ENST00000617603 606 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AC074276.2-201ENST00000619891 348 ntBASIC4.16□□□□□ -1.74
LMO4P61968 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.16□□□□□ -1.74
LMO4P61968 AC006840.1-201ENST00000623069 542 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.16□□□□□ -1.74
LMO4P61968 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.16□□□□□ -1.74
LMO4P61968 MTND2P41-201ENST00000637599 773 ntBASIC4.16□□□□□ -1.74
LMO4P61968 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
LMO4P61968 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMO4P61968 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMO4P61968 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMO4P61968 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMO4P61968 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMO4P61968 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMO4P61968 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
LMO4P61968 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMO4P61968 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMO4P61968 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMO4P61968 AC093297.3-201ENST00000607056 2517 ntBASIC4.16□□□□□ -1.74
LMO4P61968 AL606537.1-201ENST00000607258 2011 ntBASIC4.16□□□□□ -1.74
LMO4P61968 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMO4P61968 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LMO4P61968 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
LMO4P61968 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.15□□□□□ -1.74
LMO4P61968 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
LMO4P61968 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LMO4P61968 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LMO4P61968 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LMO4P61968 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
LMO4P61968 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LMO4P61968 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LMO4P61968 UGT2B26P-201ENST00000508672 1613 ntBASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms