Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN20P56880 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN20P56880 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN20P56880 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN20P56880 IGLV2-28-201ENST00000520681 304 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.8□□□□□ -1.64
CLDN20P56880 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN20P56880 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN20P56880 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN20P56880 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN20P56880 MTND1P8-201ENST00000571424 950 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 RN7SL339P-201ENST00000580597 296 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN20P56880 RN7SL435P-201ENST00000584418 282 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 AC069307.1-201ENST00000602820 447 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 AC108738.1-201ENST00000603703 237 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 AC009027.1-201ENST00000604510 479 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN20P56880 AC244107.2-201ENST00000611773 76 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 AL356274.1-201ENST00000617064 410 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 AP004607.9-201ENST00000618202 316 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 AC015660.5-201ENST00000623238 564 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 AP002505.2-201ENST00000623585 696 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CLDN20P56880 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CLDN20P56880 AC006927.2-201ENST00000639256 389 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 AC119674.1-212ENST00000641155 993 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN20P56880 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN20P56880 AL590763.1-201ENST00000398297 1545 ntBASIC4.8□□□□□ -1.64
CLDN20P56880 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN20P56880 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN20P56880 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN20P56880 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CLDN20P56880 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN20P56880 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN20P56880 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CLDN20P56880 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN20P56880 AC112198.2-201ENST00000426589 6996 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN20P56880 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLDN20P56880 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN20P56880 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLDN20P56880 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN20P56880 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN20P56880 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLDN20P56880 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN20P56880 RNU6-207P-201ENST00000384137 107 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 MIR223-201ENST00000385204 110 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CLDN20P56880 RNU6-584P-201ENST00000410350 95 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 SNORA79B-201ENST00000410557 148 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AC010385.1-201ENST00000412374 256 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 EIF4A1P1-201ENST00000420241 934 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 OR6K4P-201ENST00000423179 955 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 PTP4A1P7-201ENST00000423476 514 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AC115285.1-201ENST00000424879 736 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN20P56880 AC005189.1-201ENST00000431286 310 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 CNOT7P2-201ENST00000441051 832 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 RPS11P7-201ENST00000442125 465 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AURKAPS1-201ENST00000451805 1212 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN20P56880 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN20P56880 RN7SL799P-201ENST00000475891 298 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AC104982.1-201ENST00000478775 574 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AC079841.1-201ENST00000481228 950 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AC008953.1-201ENST00000497334 318 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN20P56880 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN20P56880 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN20P56880 AC010460.2-201ENST00000509054 677 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.79□□□□□ -1.64
CLDN20P56880 AC010376.1-201ENST00000522101 334 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 OR8X1P-201ENST00000534542 869 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 SETP1-201ENST00000556014 845 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN20P56880 AC023825.1-201ENST00000566704 1030 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN20P56880 AL049844.2-201ENST00000604280 628 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AL451049.1-201ENST00000608672 497 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 SDR42E1P1-201ENST00000611327 477 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AL512427.1-201ENST00000618593 349 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AC022106.2-201ENST00000620114 757 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AP003400.3-201ENST00000624904 346 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 AC099654.6-201ENST00000636487 512 ntBASIC4.79□□□□□ -1.64
CLDN20P56880 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN20P56880 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN20P56880 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN20P56880 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN20P56880 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN20P56880 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CLDN20P56880 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN20P56880 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN20P56880 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN20P56880 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN20P56880 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN20P56880 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN20P56880 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms