Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PKNOX1P55347 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.6□□□□□ -1.67
PKNOX1P55347 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.6□□□□□ -1.67
PKNOX1P55347 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PKNOX1P55347 IRF5P1-201ENST00000504852 2164 ntBASIC4.6□□□□□ -1.67
PKNOX1P55347 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.6□□□□□ -1.67
PKNOX1P55347 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PKNOX1P55347 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PKNOX1P55347 U8.4-201ENST00000363626 134 ntBASIC4.6□□□□□ -1.67
PKNOX1P55347 HDGFP1-201ENST00000405943 252 ntBASIC4.6□□□□□ -1.67
PKNOX1P55347 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.6□□□□□ -1.67
PKNOX1P55347 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.6□□□□□ -1.67
PKNOX1P55347 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.6□□□□□ -1.67
PKNOX1P55347 PPIAP13-201ENST00000434706 478 ntBASIC4.6□□□□□ -1.67
PKNOX1P55347 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.6□□□□□ -1.67
PKNOX1P55347 AC092647.3-201ENST00000443044 633 ntBASIC4.6□□□□□ -1.67
PKNOX1P55347 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.6□□□□□ -1.67
PKNOX1P55347 AC234781.3-201ENST00000452540 973 ntBASIC4.6□□□□□ -1.67
PKNOX1P55347 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.6□□□□□ -1.67
PKNOX1P55347 AC022795.1-201ENST00000473808 480 ntBASIC4.6□□□□□ -1.67
PKNOX1P55347 RPL37AP8-201ENST00000494116 276 ntBASIC4.6□□□□□ -1.67
PKNOX1P55347 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.6□□□□□ -1.67
PKNOX1P55347 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.6□□□□□ -1.67
PKNOX1P55347 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PKNOX1P55347 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.6□□□□□ -1.67
PKNOX1P55347 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.6□□□□□ -1.67
PKNOX1P55347 MIR4675-201ENST00000577898 77 ntBASIC4.6□□□□□ -1.67
PKNOX1P55347 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.6□□□□□ -1.67
PKNOX1P55347 AC011453.2-201ENST00000603737 729 ntBASIC4.6□□□□□ -1.67
PKNOX1P55347 AC091979.2-201ENST00000607514 214 ntBASIC4.6□□□□□ -1.67
PKNOX1P55347 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.6□□□□□ -1.67
PKNOX1P55347 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PKNOX1P55347 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.6□□□□□ -1.67
PKNOX1P55347 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PKNOX1P55347 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.6□□□□□ -1.67
PKNOX1P55347 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PKNOX1P55347 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PKNOX1P55347 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PKNOX1P55347 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PKNOX1P55347 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.6□□□□□ -1.67
PKNOX1P55347 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PKNOX1P55347 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.6□□□□□ -1.67
PKNOX1P55347 AC007382.1-201ENST00000624376 2618 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
PKNOX1P55347 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
PKNOX1P55347 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.67
PKNOX1P55347 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PKNOX1P55347 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
PKNOX1P55347 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PKNOX1P55347 RNA5SP372-201ENST00000390836 115 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 U3.30-201ENST00000391308 210 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 CHMP1B2P-201ENST00000399581 597 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 AL031119.1-201ENST00000404707 1879 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.59□□□□□ -1.67
PKNOX1P55347 RNA5SP146-201ENST00000410743 123 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PKNOX1P55347 CEACAMP8-201ENST00000413902 580 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.59□□□□□ -1.67
PKNOX1P55347 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.59□□□□□ -1.67
PKNOX1P55347 AC004448.2-201ENST00000422360 586 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PKNOX1P55347 PRPF38AP2-201ENST00000438179 851 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.59□□□□□ -1.67
PKNOX1P55347 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PKNOX1P55347 AL356390.1-201ENST00000455684 397 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 RPS5P7-201ENST00000456664 608 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.59□□□□□ -1.67
PKNOX1P55347 AC105918.1-201ENST00000474399 838 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 AC008410.1-201ENST00000483777 339 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 RN7SL214P-201ENST00000487317 265 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 GAPDHP56-201ENST00000506031 988 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.59□□□□□ -1.67
PKNOX1P55347 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.59□□□□□ -1.67
PKNOX1P55347 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.59□□□□□ -1.67
PKNOX1P55347 AC134698.5-201ENST00000519444 336 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PKNOX1P55347 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.59□□□□□ -1.67
PKNOX1P55347 HAUS8P1-201ENST00000549005 542 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 AC133555.2-201ENST00000550213 292 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.59□□□□□ -1.67
PKNOX1P55347 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.59□□□□□ -1.67
PKNOX1P55347 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.59□□□□□ -1.67
PKNOX1P55347 AC015912.2-201ENST00000571053 181 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.59□□□□□ -1.67
PKNOX1P55347 AC096553.1-201ENST00000605169 829 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.59□□□□□ -1.67
PKNOX1P55347 AC107905.1-201ENST00000616204 426 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 AC017104.4-201ENST00000636283 1592 ntBASIC4.59□□□□□ -1.67
PKNOX1P55347 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.59□□□□□ -1.67
PKNOX1P55347 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PKNOX1P55347 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
PKNOX1P55347 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PKNOX1P55347 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PKNOX1P55347 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.58□□□□□ -1.68
PKNOX1P55347 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PKNOX1P55347 EOGT-210ENST00000615922 1931 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
PKNOX1P55347 AP001002.1-201ENST00000625148 1513 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
PKNOX1P55347 NCLP2-201ENST00000416078 1462 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms