Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RPS27AP17-201ENST00000463344 455 ntBASIC6.4□□□□□ -1.38
CLTCL1P53675 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.4□□□□□ -1.38
CLTCL1P53675 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CLTCL1P53675 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.4□□□□□ -1.38
CLTCL1P53675 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.4□□□□□ -1.38
CLTCL1P53675 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC6.4□□□□□ -1.38
CLTCL1P53675 AC106785.1-201ENST00000565935 262 ntBASIC6.4□□□□□ -1.38
CLTCL1P53675 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
CLTCL1P53675 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
CLTCL1P53675 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
CLTCL1P53675 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.39
CLTCL1P53675 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CLTCL1P53675 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLTCL1P53675 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.4□□□□□ -1.39
CLTCL1P53675 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
CLTCL1P53675 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLTCL1P53675 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
CLTCL1P53675 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CLTCL1P53675 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CLTCL1P53675 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLTCL1P53675 AL359922.3-201ENST00000624779 1670 ntBASIC6.4□□□□□ -1.39
CLTCL1P53675 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLTCL1P53675 AC104118.1-201ENST00000607625 1589 ntBASIC6.4□□□□□ -1.39
CLTCL1P53675 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC6.4□□□□□ -1.39
CLTCL1P53675 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.4□□□□□ -1.39
CLTCL1P53675 CASKP1-201ENST00000412870 582 ntBASIC6.39□□□□□ -1.39
CLTCL1P53675 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.39□□□□□ -1.39
CLTCL1P53675 MFSD13B-201ENST00000420133 1290 ntBASIC6.39□□□□□ -1.39
CLTCL1P53675 AC004938.1-201ENST00000438468 308 ntBASIC6.39□□□□□ -1.39
CLTCL1P53675 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CLTCL1P53675 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.39□□□□□ -1.39
CLTCL1P53675 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.39□□□□□ -1.39
CLTCL1P53675 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.39□□□□□ -1.39
CLTCL1P53675 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.39□□□□□ -1.39
CLTCL1P53675 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CLTCL1P53675 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC6.39□□□□□ -1.39
CLTCL1P53675 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
CLTCL1P53675 AL355852.1-201ENST00000454081 1771 ntBASIC6.39□□□□□ -1.39
CLTCL1P53675 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CLTCL1P53675 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLTCL1P53675 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC6.39□□□□□ -1.39
CLTCL1P53675 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLTCL1P53675 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CLTCL1P53675 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
CLTCL1P53675 RPS26P8-201ENST00000393490 348 ntBASIC6.39□□□□□ -1.39
CLTCL1P53675 EI24P3-201ENST00000399046 1062 ntBASIC6.39□□□□□ -1.39
CLTCL1P53675 RN7SKP33-201ENST00000410942 340 ntBASIC6.39□□□□□ -1.39
CLTCL1P53675 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLTCL1P53675 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLTCL1P53675 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC6.39□□□□□ -1.39
CLTCL1P53675 CDC27P1-201ENST00000445384 715 ntBASIC6.39□□□□□ -1.39
CLTCL1P53675 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.39□□□□□ -1.39
CLTCL1P53675 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC6.39□□□□□ -1.39
CLTCL1P53675 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.39□□□□□ -1.39
CLTCL1P53675 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.39□□□□□ -1.39
CLTCL1P53675 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.39□□□□□ -1.39
CLTCL1P53675 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.39□□□□□ -1.39
CLTCL1P53675 AL136164.3-201ENST00000624429 3978 ntBASIC6.38□□□□□ -1.39
CLTCL1P53675 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLTCL1P53675 AC099654.3-201ENST00000447087 1546 ntBASIC6.38□□□□□ -1.39
CLTCL1P53675 AC100871.1-201ENST00000507871 1456 ntBASIC6.38□□□□□ -1.39
CLTCL1P53675 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CLTCL1P53675 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CLTCL1P53675 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.38□□□□□ -1.39
CLTCL1P53675 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLTCL1P53675 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLTCL1P53675 PPIAP31-201ENST00000405422 495 ntBASIC6.38□□□□□ -1.39
CLTCL1P53675 RN7SKP167-201ENST00000411047 285 ntBASIC6.38□□□□□ -1.39
CLTCL1P53675 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.38□□□□□ -1.39
CLTCL1P53675 AL158073.1-201ENST00000426848 1104 ntBASIC6.38□□□□□ -1.39
CLTCL1P53675 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.38□□□□□ -1.39
CLTCL1P53675 AL132765.1-201ENST00000434165 553 ntBASIC6.38□□□□□ -1.39
CLTCL1P53675 RNA5SP446-201ENST00000515955 82 ntBASIC6.38□□□□□ -1.39
CLTCL1P53675 SNORA31.9-201ENST00000516429 84 ntBASIC6.38□□□□□ -1.39
CLTCL1P53675 AP001804.2-201ENST00000533932 910 ntBASIC6.38□□□□□ -1.39
CLTCL1P53675 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.38□□□□□ -1.39
CLTCL1P53675 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.38□□□□□ -1.39
CLTCL1P53675 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.38□□□□□ -1.39
CLTCL1P53675 RN7SL600P-201ENST00000581811 299 ntBASIC6.38□□□□□ -1.39
CLTCL1P53675 MIR3653-201ENST00000625572 110 ntBASIC6.38□□□□□ -1.39
CLTCL1P53675 LINC01808-202ENST00000641680 1116 ntBASIC6.38□□□□□ -1.39
CLTCL1P53675 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CLTCL1P53675 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLTCL1P53675 AC105074.1-201ENST00000623380 3095 ntBASIC6.38□□□□□ -1.39
CLTCL1P53675 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLTCL1P53675 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CLTCL1P53675 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CLTCL1P53675 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLTCL1P53675 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLTCL1P53675 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.37□□□□□ -1.39
CLTCL1P53675 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLTCL1P53675 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLTCL1P53675 MIR3065-201ENST00000390137 79 ntBASIC6.37□□□□□ -1.39
CLTCL1P53675 PEX12P1-201ENST00000400284 1048 ntBASIC6.37□□□□□ -1.39
CLTCL1P53675 AL358178.1-201ENST00000407698 397 ntBASIC6.37□□□□□ -1.39
CLTCL1P53675 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.37□□□□□ -1.39
CLTCL1P53675 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.37□□□□□ -1.39
CLTCL1P53675 LSM3P2-201ENST00000551246 273 ntBASIC6.37□□□□□ -1.39
CLTCL1P53675 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.37□□□□□ -1.39
CLTCL1P53675 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms