Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RPL36AP15-201ENST00000444514 266 ntBASIC4.9□□□□□ -1.63
PDX1P52945 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.9□□□□□ -1.63
PDX1P52945 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.9□□□□□ -1.63
PDX1P52945 AC073264.2-201ENST00000448886 166 ntBASIC4.9□□□□□ -1.63
PDX1P52945 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.9□□□□□ -1.63
PDX1P52945 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.9□□□□□ -1.63
PDX1P52945 HMGN1P15-201ENST00000513870 295 ntBASIC4.9□□□□□ -1.63
PDX1P52945 VTA1P2-201ENST00000520205 911 ntBASIC4.9□□□□□ -1.63
PDX1P52945 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.9□□□□□ -1.63
PDX1P52945 OR5AN2P-201ENST00000534535 896 ntBASIC4.9□□□□□ -1.63
PDX1P52945 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.9□□□□□ -1.63
PDX1P52945 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.9□□□□□ -1.63
PDX1P52945 MIR4697-201ENST00000582977 78 ntBASIC4.9□□□□□ -1.63
PDX1P52945 PRPF19P1-201ENST00000584766 898 ntBASIC4.9□□□□□ -1.63
PDX1P52945 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.9□□□□□ -1.63
PDX1P52945 AL731566.2-201ENST00000618971 317 ntBASIC4.9□□□□□ -1.63
PDX1P52945 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.9□□□□□ -1.63
PDX1P52945 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.9□□□□□ -1.63
PDX1P52945 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.9□□□□□ -1.63
PDX1P52945 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDX1P52945 MAPK10-328ENST00000641553 4009 ntBASIC4.9□□□□□ -1.63
PDX1P52945 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.9□□□□□ -1.63
PDX1P52945 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDX1P52945 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDX1P52945 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDX1P52945 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDX1P52945 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.89□□□□□ -1.63
PDX1P52945 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDX1P52945 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.89□□□□□ -1.63
PDX1P52945 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDX1P52945 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDX1P52945 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PDX1P52945 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PDX1P52945 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDX1P52945 AC126755.2-208ENST00000327792 462 ntBASIC4.89□□□□□ -1.63
PDX1P52945 AC138969.1-213ENST00000331436 462 ntBASIC4.89□□□□□ -1.63
PDX1P52945 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDX1P52945 RNU1-32P-201ENST00000363937 159 ntBASIC4.89□□□□□ -1.63
PDX1P52945 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.89□□□□□ -1.63
PDX1P52945 RNU1-74P-201ENST00000384108 171 ntBASIC4.89□□□□□ -1.63
PDX1P52945 SNORA66-201ENST00000384792 133 ntBASIC4.89□□□□□ -1.63
PDX1P52945 AL034403.1-201ENST00000399414 885 ntBASIC4.89□□□□□ -1.63
PDX1P52945 NPM1P40-201ENST00000412758 733 ntBASIC4.89□□□□□ -1.63
PDX1P52945 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.89□□□□□ -1.63
PDX1P52945 BX323845.1-201ENST00000432417 179 ntBASIC4.89□□□□□ -1.63
PDX1P52945 SCAND3P1-201ENST00000439854 1060 ntBASIC4.89□□□□□ -1.63
PDX1P52945 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.89□□□□□ -1.63
PDX1P52945 AL353898.1-201ENST00000444055 238 ntBASIC4.89□□□□□ -1.63
PDX1P52945 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.89□□□□□ -1.63
PDX1P52945 GAPDHP14-201ENST00000450472 937 ntBASIC4.89□□□□□ -1.63
PDX1P52945 RBMY2TP-201ENST00000451162 947 ntBASIC4.89□□□□□ -1.63
PDX1P52945 PRPF38AP1-201ENST00000451976 933 ntBASIC4.89□□□□□ -1.63
PDX1P52945 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.89□□□□□ -1.63
PDX1P52945 RPL5P13-201ENST00000462840 709 ntBASIC4.89□□□□□ -1.63
PDX1P52945 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.89□□□□□ -1.63
PDX1P52945 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDX1P52945 BTG4P1-201ENST00000510421 183 ntBASIC4.89□□□□□ -1.63
PDX1P52945 SNORA76.2-201ENST00000517095 137 ntBASIC4.89□□□□□ -1.63
PDX1P52945 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.89□□□□□ -1.63
PDX1P52945 RAB9BP1-201ENST00000519581 626 ntBASIC4.89□□□□□ -1.63
PDX1P52945 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.89□□□□□ -1.63
PDX1P52945 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.89□□□□□ -1.63
PDX1P52945 AC138832.1-201ENST00000522871 556 ntBASIC4.89□□□□□ -1.63
PDX1P52945 AC019227.1-201ENST00000526902 510 ntBASIC4.89□□□□□ -1.63
PDX1P52945 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PDX1P52945 AP006289.1-201ENST00000538089 277 ntBASIC4.89□□□□□ -1.63
PDX1P52945 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.89□□□□□ -1.63
PDX1P52945 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.89□□□□□ -1.63
PDX1P52945 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.89□□□□□ -1.63
PDX1P52945 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDX1P52945 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.89□□□□□ -1.63
PDX1P52945 AC068790.7-201ENST00000602347 528 ntBASIC4.89□□□□□ -1.63
PDX1P52945 MIR6780A-201ENST00000615089 68 ntBASIC4.89□□□□□ -1.63
PDX1P52945 AL158062.1-201ENST00000619632 745 ntBASIC4.89□□□□□ -1.63
PDX1P52945 AL391262.2-201ENST00000622466 494 ntBASIC4.89□□□□□ -1.63
PDX1P52945 AC097460.3-201ENST00000623099 442 ntBASIC4.89□□□□□ -1.63
PDX1P52945 AC092159.4-201ENST00000624944 550 ntBASIC4.89□□□□□ -1.63
PDX1P52945 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.89□□□□□ -1.63
PDX1P52945 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.89□□□□□ -1.63
PDX1P52945 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.89□□□□□ -1.63
PDX1P52945 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDX1P52945 CDC27P2-201ENST00000425026 1922 ntBASIC4.89□□□□□ -1.63
PDX1P52945 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.89□□□□□ -1.63
PDX1P52945 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDX1P52945 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.89□□□□□ -1.63
PDX1P52945 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDX1P52945 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDX1P52945 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDX1P52945 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.88□□□□□ -1.63
PDX1P52945 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDX1P52945 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDX1P52945 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDX1P52945 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDX1P52945 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PDX1P52945 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.88□□□□□ -1.63
PDX1P52945 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.88□□□□□ -1.63
PDX1P52945 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PDX1P52945 AC007618.1-201ENST00000366455 732 ntBASIC4.88□□□□□ -1.63
PDX1P52945 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDX1P52945 RPS4XP9-201ENST00000405151 780 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms