Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NEK3P51956 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NEK3P51956 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEK3P51956 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NEK3P51956 RNA5SP132-201ENST00000364725 118 ntBASIC5.71□□□□□ -1.5
NEK3P51956 RN7SKP124-201ENST00000364730 341 ntBASIC5.71□□□□□ -1.5
NEK3P51956 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NEK3P51956 AC005042.1-201ENST00000393397 800 ntBASIC5.71□□□□□ -1.5
NEK3P51956 GAPDHP42-201ENST00000406848 981 ntBASIC5.71□□□□□ -1.5
NEK3P51956 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.71□□□□□ -1.5
NEK3P51956 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.71□□□□□ -1.5
NEK3P51956 RPS7P9-201ENST00000414704 586 ntBASIC5.71□□□□□ -1.5
NEK3P51956 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.71□□□□□ -1.5
NEK3P51956 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.71□□□□□ -1.5
NEK3P51956 TAF13P2-201ENST00000416876 286 ntBASIC5.71□□□□□ -1.5
NEK3P51956 GAPDHP49-201ENST00000421421 961 ntBASIC5.71□□□□□ -1.5
NEK3P51956 HMGN2P27-201ENST00000427352 270 ntBASIC5.71□□□□□ -1.5
NEK3P51956 RPL7P4-203ENST00000430239 730 ntBASIC5.71□□□□□ -1.5
NEK3P51956 AL359265.1-201ENST00000440296 795 ntBASIC5.71□□□□□ -1.5
NEK3P51956 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.71□□□□□ -1.5
NEK3P51956 AC005002.1-201ENST00000447458 540 ntBASIC5.71□□□□□ -1.5
NEK3P51956 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.71□□□□□ -1.5
NEK3P51956 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.71□□□□□ -1.5
NEK3P51956 AC091959.2-201ENST00000477363 321 ntBASIC5.71□□□□□ -1.5
NEK3P51956 DUTP1-201ENST00000493631 470 ntBASIC5.71□□□□□ -1.5
NEK3P51956 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.71□□□□□ -1.5
NEK3P51956 IGBP1P5-201ENST00000507524 1000 ntBASIC5.71□□□□□ -1.5
NEK3P51956 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.71□□□□□ -1.5
NEK3P51956 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.71□□□□□ -1.5
NEK3P51956 HMGB1P23-201ENST00000518743 568 ntBASIC5.71□□□□□ -1.5
NEK3P51956 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.71□□□□□ -1.5
NEK3P51956 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.71□□□□□ -1.5
NEK3P51956 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.71□□□□□ -1.5
NEK3P51956 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.71□□□□□ -1.5
NEK3P51956 YWHABP2-201ENST00000540201 713 ntBASIC5.71□□□□□ -1.5
NEK3P51956 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.71□□□□□ -1.5
NEK3P51956 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.71□□□□□ -1.5
NEK3P51956 AC010503.3-201ENST00000594355 540 ntBASIC5.71□□□□□ -1.5
NEK3P51956 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
NEK3P51956 AC024060.1-201ENST00000607052 494 ntBASIC5.71□□□□□ -1.5
NEK3P51956 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.71□□□□□ -1.5
NEK3P51956 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NEK3P51956 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.71□□□□□ -1.5
NEK3P51956 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NEK3P51956 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEK3P51956 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEK3P51956 CASC19-204ENST00000641001 2055 ntBASIC5.71□□□□□ -1.5
NEK3P51956 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NEK3P51956 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NEK3P51956 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.71□□□□□ -1.5
NEK3P51956 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
NEK3P51956 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEK3P51956 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.7□□□□□ -1.5
NEK3P51956 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEK3P51956 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NEK3P51956 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.7□□□□□ -1.5
NEK3P51956 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NEK3P51956 AL353743.4-201ENST00000422653 1547 ntBASIC5.7□□□□□ -1.5
NEK3P51956 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NEK3P51956 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.7□□□□□ -1.5
NEK3P51956 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.7□□□□□ -1.5
NEK3P51956 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NEK3P51956 AL121886.1-201ENST00000358609 435 ntBASIC5.7□□□□□ -1.5
NEK3P51956 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NEK3P51956 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
NEK3P51956 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NEK3P51956 AC114814.2-201ENST00000419195 485 ntBASIC5.7□□□□□ -1.5
NEK3P51956 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.7□□□□□ -1.5
NEK3P51956 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.7□□□□□ -1.5
NEK3P51956 AL133173.1-201ENST00000423458 397 ntBASIC5.7□□□□□ -1.5
NEK3P51956 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.7□□□□□ -1.5
NEK3P51956 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.7□□□□□ -1.5
NEK3P51956 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.7□□□□□ -1.5
NEK3P51956 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.7□□□□□ -1.5
NEK3P51956 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
NEK3P51956 AC244505.3-201ENST00000454598 187 ntBASIC5.7□□□□□ -1.5
NEK3P51956 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.7□□□□□ -1.5
NEK3P51956 PPIAP21-201ENST00000464473 501 ntBASIC5.7□□□□□ -1.5
NEK3P51956 AC006511.1-201ENST00000470614 315 ntBASIC5.7□□□□□ -1.5
NEK3P51956 AC073522.1-201ENST00000483312 377 ntBASIC5.7□□□□□ -1.5
NEK3P51956 AC108729.1-201ENST00000487812 947 ntBASIC5.7□□□□□ -1.5
NEK3P51956 AC079203.1-201ENST00000487972 404 ntBASIC5.7□□□□□ -1.5
NEK3P51956 AC091860.1-201ENST00000505723 432 ntBASIC5.7□□□□□ -1.5
NEK3P51956 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.7□□□□□ -1.5
NEK3P51956 HPRT1P1-201ENST00000509498 657 ntBASIC5.7□□□□□ -1.5
NEK3P51956 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.7□□□□□ -1.5
NEK3P51956 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
NEK3P51956 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.7□□□□□ -1.5
NEK3P51956 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.7□□□□□ -1.5
NEK3P51956 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
NEK3P51956 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.7□□□□□ -1.5
NEK3P51956 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.7□□□□□ -1.5
NEK3P51956 AC018552.3-201ENST00000567416 561 ntBASIC5.7□□□□□ -1.5
NEK3P51956 MTCO1P40-201ENST00000574371 625 ntBASIC5.7□□□□□ -1.5
NEK3P51956 AL022394.1-201ENST00000606979 292 ntBASIC5.7□□□□□ -1.5
NEK3P51956 AL139124.1-201ENST00000609123 421 ntBASIC5.7□□□□□ -1.5
NEK3P51956 AL353726.1-201ENST00000614041 1000 ntBASIC5.7□□□□□ -1.5
NEK3P51956 MIR6826-201ENST00000617808 98 ntBASIC5.7□□□□□ -1.5
NEK3P51956 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.7□□□□□ -1.5
NEK3P51956 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms