Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CXCL12P48061 ACTR3P2-201ENST00000439585 1257 ntBASIC4.68□□□□□ -1.66
CXCL12P48061 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.68□□□□□ -1.66
CXCL12P48061 EEF1A1P1-201ENST00000447052 739 ntBASIC4.68□□□□□ -1.66
CXCL12P48061 MRPL35P2-201ENST00000448009 511 ntBASIC4.68□□□□□ -1.66
CXCL12P48061 SNORA84-201ENST00000459229 133 ntBASIC4.68□□□□□ -1.66
CXCL12P48061 RPS26P24-201ENST00000497656 331 ntBASIC4.68□□□□□ -1.66
CXCL12P48061 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.68□□□□□ -1.66
CXCL12P48061 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.68□□□□□ -1.66
CXCL12P48061 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
CXCL12P48061 AC025884.1-201ENST00000556034 378 ntBASIC4.68□□□□□ -1.66
CXCL12P48061 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CXCL12P48061 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CXCL12P48061 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.68□□□□□ -1.66
CXCL12P48061 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CXCL12P48061 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CXCL12P48061 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CXCL12P48061 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.68□□□□□ -1.66
CXCL12P48061 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CXCL12P48061 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CXCL12P48061 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CXCL12P48061 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.68□□□□□ -1.66
CXCL12P48061 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL12P48061 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.67□□□□□ -1.66
CXCL12P48061 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL12P48061 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.67□□□□□ -1.66
CXCL12P48061 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CXCL12P48061 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CXCL12P48061 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL12P48061 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL12P48061 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL12P48061 AL031595.2-201ENST00000624215 19071 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 AL136164.3-201ENST00000624429 3978 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.67□□□□□ -1.66
CXCL12P48061 AC021146.4-201ENST00000309229 279 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CXCL12P48061 AC017079.1-201ENST00000333650 415 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL12P48061 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL12P48061 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL12P48061 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL12P48061 RPL32P23-201ENST00000397237 405 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 ATP5F1P2-201ENST00000398143 760 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 RPL12P9-201ENST00000412942 488 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 RPL36AP36-201ENST00000418616 301 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 GLUD1P9-201ENST00000420997 1173 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.67□□□□□ -1.66
CXCL12P48061 RPL34P6-201ENST00000432390 345 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 RPL7AP61-201ENST00000443410 636 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 Z95327.1-201ENST00000446082 482 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.67□□□□□ -1.66
CXCL12P48061 AC090142.1-201ENST00000465776 462 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 GOLGA5P1-201ENST00000507317 980 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.67□□□□□ -1.66
CXCL12P48061 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.67□□□□□ -1.66
CXCL12P48061 PARP4P3-201ENST00000510265 317 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL12P48061 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.67□□□□□ -1.66
CXCL12P48061 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL12P48061 OR8G5-201ENST00000524943 1041 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.67□□□□□ -1.66
CXCL12P48061 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.67□□□□□ -1.66
CXCL12P48061 GLRXP2-201ENST00000555594 321 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL12P48061 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.67□□□□□ -1.66
CXCL12P48061 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.67□□□□□ -1.66
CXCL12P48061 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL12P48061 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CXCL12P48061 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL12P48061 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CXCL12P48061 AC008079.2-201ENST00000623543 20396 ntBASIC4.67□□□□□ -1.66
CXCL12P48061 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.66□□□□□ -1.66
CXCL12P48061 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CXCL12P48061 AC133552.1-201ENST00000569988 4007 ntBASIC4.66□□□□□ -1.66
CXCL12P48061 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CXCL12P48061 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.66□□□□□ -1.66
CXCL12P48061 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CXCL12P48061 AL590762.2-201ENST00000395798 571 ntBASIC4.66□□□□□ -1.66
CXCL12P48061 SDHCP2-201ENST00000398565 501 ntBASIC4.66□□□□□ -1.66
CXCL12P48061 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.66□□□□□ -1.66
CXCL12P48061 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.66□□□□□ -1.66
CXCL12P48061 UQCRHP4-201ENST00000471686 272 ntBASIC4.66□□□□□ -1.66
CXCL12P48061 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.66□□□□□ -1.66
CXCL12P48061 AC020593.1-201ENST00000507399 299 ntBASIC4.66□□□□□ -1.66
CXCL12P48061 AC016559.2-201ENST00000510759 359 ntBASIC4.66□□□□□ -1.66
CXCL12P48061 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.66□□□□□ -1.66
CXCL12P48061 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.66□□□□□ -1.66
CXCL12P48061 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CXCL12P48061 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CXCL12P48061 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.66□□□□□ -1.66
CXCL12P48061 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.66□□□□□ -1.66
CXCL12P48061 MTCYBP13-201ENST00000578634 1093 ntBASIC4.66□□□□□ -1.66
CXCL12P48061 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.66□□□□□ -1.66
CXCL12P48061 AC011815.3-201ENST00000624194 473 ntBASIC4.66□□□□□ -1.66
CXCL12P48061 RNA5SP196-201ENST00000625967 102 ntBASIC4.66□□□□□ -1.66
CXCL12P48061 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.66□□□□□ -1.66
CXCL12P48061 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.66□□□□□ -1.66
CXCL12P48061 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.66□□□□□ -1.66
CXCL12P48061 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CXCL12P48061 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 419.6 ms