Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC027026.1-201ENST00000532323 742 ntBASIC5.4□□□□□ -1.54
MMP13P45452 AL049779.2-201ENST00000553847 315 ntBASIC5.4□□□□□ -1.54
MMP13P45452 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.4□□□□□ -1.54
MMP13P45452 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
MMP13P45452 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.4□□□□□ -1.54
MMP13P45452 AC011840.5-201ENST00000582125 771 ntBASIC5.4□□□□□ -1.54
MMP13P45452 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.4□□□□□ -1.54
MMP13P45452 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.4□□□□□ -1.54
MMP13P45452 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.4□□□□□ -1.54
MMP13P45452 AL162431.4-201ENST00000604674 411 ntBASIC5.4□□□□□ -1.54
MMP13P45452 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.4□□□□□ -1.54
MMP13P45452 AP005229.2-201ENST00000609980 697 ntBASIC5.4□□□□□ -1.54
MMP13P45452 AC109309.2-201ENST00000612597 332 ntBASIC5.4□□□□□ -1.54
MMP13P45452 MIR6862-1-201ENST00000613016 70 ntBASIC5.4□□□□□ -1.54
MMP13P45452 MIR6862-2-201ENST00000614755 70 ntBASIC5.4□□□□□ -1.54
MMP13P45452 AC015914.2-201ENST00000618167 288 ntBASIC5.4□□□□□ -1.54
MMP13P45452 MIR6729-201ENST00000618194 65 ntBASIC5.4□□□□□ -1.54
MMP13P45452 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.4□□□□□ -1.54
MMP13P45452 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
MMP13P45452 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.4□□□□□ -1.55
MMP13P45452 AL450345.1-202ENST00000605741 3881 ntBASIC5.4□□□□□ -1.55
MMP13P45452 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
MMP13P45452 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
MMP13P45452 ZNF652P1-201ENST00000442420 1309 ntBASIC5.4□□□□□ -1.55
MMP13P45452 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
MMP13P45452 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
MMP13P45452 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
MMP13P45452 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
MMP13P45452 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
MMP13P45452 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
MMP13P45452 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.4□□□□□ -1.55
MMP13P45452 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
MMP13P45452 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP13P45452 AC026523.2-201ENST00000625039 7739 ntBASIC5.39□□□□□ -1.55
MMP13P45452 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
MMP13P45452 AC005294.1-201ENST00000355509 281 ntBASIC5.39□□□□□ -1.55
MMP13P45452 RNA5SP183-201ENST00000362452 119 ntBASIC5.39□□□□□ -1.55
MMP13P45452 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
MMP13P45452 SNORA67-201ENST00000384423 137 ntBASIC5.39□□□□□ -1.55
MMP13P45452 GAPDHP15-201ENST00000398586 975 ntBASIC5.39□□□□□ -1.55
MMP13P45452 MIR1271-201ENST00000408537 86 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AL445213.1-201ENST00000412589 747 ntBASIC5.39□□□□□ -1.55
MMP13P45452 KRR1P1-201ENST00000419430 803 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AC016907.1-201ENST00000419483 435 ntBASIC5.39□□□□□ -1.55
MMP13P45452 NANOGP5-201ENST00000424456 877 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP13P45452 OR2AH1P-201ENST00000425717 928 ntBASIC5.39□□□□□ -1.55
MMP13P45452 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MMP13P45452 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP13P45452 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP13P45452 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.39□□□□□ -1.55
MMP13P45452 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.39□□□□□ -1.55
MMP13P45452 RPL7P6-201ENST00000480903 738 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AC116562.1-201ENST00000485355 781 ntBASIC5.39□□□□□ -1.55
MMP13P45452 MTND4LP2-201ENST00000502312 285 ntBASIC5.39□□□□□ -1.55
MMP13P45452 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP13P45452 MTND1P22-201ENST00000510572 951 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.39□□□□□ -1.55
MMP13P45452 RNA5SP373-201ENST00000517271 95 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.39□□□□□ -1.55
MMP13P45452 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.39□□□□□ -1.55
MMP13P45452 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MMP13P45452 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.39□□□□□ -1.55
MMP13P45452 OSBPL9P5-201ENST00000542581 171 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AL121839.1-201ENST00000556233 1185 ntBASIC5.39□□□□□ -1.55
MMP13P45452 ZNF971P-201ENST00000562068 1249 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AC007225.2-201ENST00000562529 256 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.39□□□□□ -1.55
MMP13P45452 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.39□□□□□ -1.55
MMP13P45452 PCNAP1-202ENST00000595299 752 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.39□□□□□ -1.55
MMP13P45452 ZNF92P3-201ENST00000596594 954 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AL133247.2-201ENST00000603236 482 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.39□□□□□ -1.55
MMP13P45452 IMMP1LP3-201ENST00000604197 224 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AC011626.1-201ENST00000604710 562 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AC022467.1-201ENST00000614738 749 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AC078880.5-201ENST00000617845 421 ntBASIC5.39□□□□□ -1.55
MMP13P45452 CYP4F35P-202ENST00000636121 390 ntBASIC5.39□□□□□ -1.55
MMP13P45452 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
MMP13P45452 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
MMP13P45452 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.39□□□□□ -1.55
MMP13P45452 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MMP13P45452 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MMP13P45452 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.39□□□□□ -1.55
MMP13P45452 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.39□□□□□ -1.55
MMP13P45452 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.39□□□□□ -1.55
MMP13P45452 AC023421.1-201ENST00000590535 1785 ntBASIC5.39□□□□□ -1.55
MMP13P45452 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MMP13P45452 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.39□□□□□ -1.55
MMP13P45452 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
MMP13P45452 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP13P45452 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
MMP13P45452 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MMP13P45452 MTCO1P11-201ENST00000429111 1528 ntBASIC5.38□□□□□ -1.55
MMP13P45452 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MMP13P45452 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
MMP13P45452 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
MMP13P45452 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms