Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX3P41225 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX3P41225 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.65□□□□□ -1.67
SOX3P41225 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SOX3P41225 AL672167.1-205ENST00000641112 3080 ntBASIC4.65□□□□□ -1.67
SOX3P41225 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SOX3P41225 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX3P41225 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SOX3P41225 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SOX3P41225 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SOX3P41225 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SOX3P41225 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SOX3P41225 SALL4P2-201ENST00000423288 2910 ntBASIC4.64□□□□□ -1.67
SOX3P41225 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SOX3P41225 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.64□□□□□ -1.67
SOX3P41225 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SOX3P41225 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SOX3P41225 MIR937-201ENST00000401271 86 ntBASIC4.64□□□□□ -1.67
SOX3P41225 SNORA77-201ENST00000408716 125 ntBASIC4.64□□□□□ -1.67
SOX3P41225 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SOX3P41225 FTLP19-201ENST00000433300 394 ntBASIC4.64□□□□□ -1.67
SOX3P41225 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.64□□□□□ -1.67
SOX3P41225 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.64□□□□□ -1.67
SOX3P41225 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SOX3P41225 SBDSP1-204ENST00000453858 737 ntBASIC4.64□□□□□ -1.67
SOX3P41225 MTND2P39-201ENST00000457230 764 ntBASIC4.64□□□□□ -1.67
SOX3P41225 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX3P41225 RPL35AP28-201ENST00000459730 331 ntBASIC4.64□□□□□ -1.67
SOX3P41225 OR9N1P-202ENST00000494289 481 ntBASIC4.64□□□□□ -1.67
SOX3P41225 AC231760.1-201ENST00000498002 260 ntBASIC4.64□□□□□ -1.67
SOX3P41225 AC021087.2-201ENST00000504656 1203 ntBASIC4.64□□□□□ -1.67
SOX3P41225 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX3P41225 AC138938.1-201ENST00000515431 782 ntBASIC4.64□□□□□ -1.67
SOX3P41225 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX3P41225 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.64□□□□□ -1.67
SOX3P41225 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.64□□□□□ -1.67
SOX3P41225 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX3P41225 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX3P41225 BNIP3P32-201ENST00000600015 554 ntBASIC4.64□□□□□ -1.67
SOX3P41225 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.64□□□□□ -1.67
SOX3P41225 Mico1.1-201ENST00000611698 204 ntBASIC4.64□□□□□ -1.67
SOX3P41225 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX3P41225 AC112694.2-201ENST00000623697 768 ntBASIC4.64□□□□□ -1.67
SOX3P41225 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX3P41225 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.64□□□□□ -1.67
SOX3P41225 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SOX3P41225 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.64□□□□□ -1.67
SOX3P41225 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX3P41225 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SOX3P41225 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.63□□□□□ -1.67
SOX3P41225 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX3P41225 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX3P41225 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX3P41225 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX3P41225 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX3P41225 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX3P41225 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SOX3P41225 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SOX3P41225 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SOX3P41225 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SOX3P41225 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX3P41225 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SOX3P41225 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX3P41225 AL022322.2-201ENST00000624072 20397 ntBASIC4.63□□□□□ -1.67
SOX3P41225 Z97832.1-201ENST00000402490 328 ntBASIC4.63□□□□□ -1.67
SOX3P41225 AP002530.1-201ENST00000405705 684 ntBASIC4.63□□□□□ -1.67
SOX3P41225 Z86062.1-201ENST00000406773 777 ntBASIC4.63□□□□□ -1.67
SOX3P41225 RN7SKP97-201ENST00000410966 333 ntBASIC4.63□□□□□ -1.67
SOX3P41225 RANP4-201ENST00000413361 655 ntBASIC4.63□□□□□ -1.67
SOX3P41225 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.63□□□□□ -1.67
SOX3P41225 CHEK2P3-201ENST00000416118 248 ntBASIC4.63□□□□□ -1.67
SOX3P41225 BTF3P9-201ENST00000418784 283 ntBASIC4.63□□□□□ -1.67
SOX3P41225 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.63□□□□□ -1.67
SOX3P41225 RPS6P14-201ENST00000425165 719 ntBASIC4.63□□□□□ -1.67
SOX3P41225 COX6CP13-201ENST00000428703 226 ntBASIC4.63□□□□□ -1.67
SOX3P41225 PRPF38AP2-201ENST00000438179 851 ntBASIC4.63□□□□□ -1.67
SOX3P41225 AL356981.1-201ENST00000454879 684 ntBASIC4.63□□□□□ -1.67
SOX3P41225 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX3P41225 RN7SL319P-201ENST00000480656 221 ntBASIC4.63□□□□□ -1.67
SOX3P41225 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SOX3P41225 AC005412.2-201ENST00000492004 341 ntBASIC4.63□□□□□ -1.67
SOX3P41225 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.63□□□□□ -1.67
SOX3P41225 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.63□□□□□ -1.67
SOX3P41225 RN7SKP34-201ENST00000516142 244 ntBASIC4.63□□□□□ -1.67
SOX3P41225 AC103833.1-201ENST00000517442 172 ntBASIC4.63□□□□□ -1.67
SOX3P41225 HMGB1P46-201ENST00000520062 610 ntBASIC4.63□□□□□ -1.67
SOX3P41225 OR5D15P-201ENST00000531671 942 ntBASIC4.63□□□□□ -1.67
SOX3P41225 AC092451.2-201ENST00000538746 658 ntBASIC4.63□□□□□ -1.67
SOX3P41225 AC006518.1-201ENST00000541449 943 ntBASIC4.63□□□□□ -1.67
SOX3P41225 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.63□□□□□ -1.67
SOX3P41225 AGGF1P9-201ENST00000561884 913 ntBASIC4.63□□□□□ -1.67
SOX3P41225 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.63□□□□□ -1.67
SOX3P41225 EIF1P5-201ENST00000585002 234 ntBASIC4.63□□□□□ -1.67
SOX3P41225 AC011487.3-201ENST00000593607 453 ntBASIC4.63□□□□□ -1.67
SOX3P41225 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.63□□□□□ -1.67
SOX3P41225 AL445493.3-201ENST00000619568 477 ntBASIC4.63□□□□□ -1.67
SOX3P41225 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.63□□□□□ -1.67
SOX3P41225 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
SOX3P41225 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.63□□□□□ -1.67
SOX3P41225 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms