Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.51□□□□□ -1.37
CPS1P31327 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.51□□□□□ -1.37
CPS1P31327 OR5BC1P-201ENST00000529327 739 ntBASIC6.51□□□□□ -1.37
CPS1P31327 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.51□□□□□ -1.37
CPS1P31327 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.51□□□□□ -1.37
CPS1P31327 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.51□□□□□ -1.37
CPS1P31327 AC007179.3-201ENST00000604976 235 ntBASIC6.51□□□□□ -1.37
CPS1P31327 MIR8059-201ENST00000620427 81 ntBASIC6.51□□□□□ -1.37
CPS1P31327 AL139254.3-201ENST00000641097 674 ntBASIC6.51□□□□□ -1.37
CPS1P31327 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CPS1P31327 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC6.51□□□□□ -1.37
CPS1P31327 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CPS1P31327 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.51□□□□□ -1.37
CPS1P31327 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CPS1P31327 AL592182.3-201ENST00000642132 3304 ntBASIC6.51□□□□□ -1.37
CPS1P31327 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CPS1P31327 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CPS1P31327 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CPS1P31327 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CPS1P31327 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.5□□□□□ -1.37
CPS1P31327 AC009963.4-201ENST00000448535 339 ntBASIC6.5□□□□□ -1.37
CPS1P31327 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.5□□□□□ -1.37
CPS1P31327 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.5□□□□□ -1.37
CPS1P31327 MIR6867-201ENST00000610636 67 ntBASIC6.5□□□□□ -1.37
CPS1P31327 AC018816.2-201ENST00000621460 353 ntBASIC6.5□□□□□ -1.37
CPS1P31327 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CPS1P31327 AC027228.2-201ENST00000567141 2154 ntBASIC6.5□□□□□ -1.37
CPS1P31327 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CPS1P31327 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CPS1P31327 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CPS1P31327 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CPS1P31327 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CPS1P31327 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
CPS1P31327 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CPS1P31327 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CPS1P31327 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CPS1P31327 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CPS1P31327 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CPS1P31327 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CPS1P31327 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.5□□□□□ -1.37
CPS1P31327 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CPS1P31327 RNU1-132P-201ENST00000364300 164 ntBASIC6.5□□□□□ -1.37
CPS1P31327 RPL7P58-201ENST00000402913 758 ntBASIC6.5□□□□□ -1.37
CPS1P31327 AC093578.1-201ENST00000415219 368 ntBASIC6.5□□□□□ -1.37
CPS1P31327 AL445584.1-201ENST00000431451 330 ntBASIC6.5□□□□□ -1.37
CPS1P31327 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.5□□□□□ -1.37
CPS1P31327 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.5□□□□□ -1.37
CPS1P31327 RPL23AP53-201ENST00000521854 457 ntBASIC6.5□□□□□ -1.37
CPS1P31327 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.5□□□□□ -1.37
CPS1P31327 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.5□□□□□ -1.37
CPS1P31327 AC090515.3-201ENST00000560431 315 ntBASIC6.5□□□□□ -1.37
CPS1P31327 AC012468.1-201ENST00000604888 430 ntBASIC6.5□□□□□ -1.37
CPS1P31327 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.5□□□□□ -1.37
CPS1P31327 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC6.5□□□□□ -1.37
CPS1P31327 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC6.49□□□□□ -1.37
CPS1P31327 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CPS1P31327 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CPS1P31327 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CPS1P31327 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CPS1P31327 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CPS1P31327 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CPS1P31327 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CPS1P31327 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CPS1P31327 MT-RNR1-201ENST00000389680 954 ntBASIC6.49□□□□□ -1.37
CPS1P31327 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC6.49□□□□□ -1.37
CPS1P31327 BTF3P10-201ENST00000433415 495 ntBASIC6.49□□□□□ -1.37
CPS1P31327 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.49□□□□□ -1.37
CPS1P31327 EIF2S2P5-201ENST00000457635 968 ntBASIC6.49□□□□□ -1.37
CPS1P31327 AC090142.1-201ENST00000465776 462 ntBASIC6.49□□□□□ -1.37
CPS1P31327 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CPS1P31327 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.49□□□□□ -1.37
CPS1P31327 AC053481.4-201ENST00000583164 216 ntBASIC6.49□□□□□ -1.37
CPS1P31327 AC140479.6-201ENST00000633535 357 ntBASIC6.49□□□□□ -1.37
CPS1P31327 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CPS1P31327 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CPS1P31327 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CPS1P31327 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.49□□□□□ -1.37
CPS1P31327 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.48□□□□□ -1.37
CPS1P31327 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CPS1P31327 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CPS1P31327 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.48□□□□□ -1.37
CPS1P31327 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.48□□□□□ -1.37
CPS1P31327 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CPS1P31327 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CPS1P31327 OR5P1P-201ENST00000299512 925 ntBASIC6.48□□□□□ -1.37
CPS1P31327 Z98745.1-201ENST00000402553 494 ntBASIC6.48□□□□□ -1.37
CPS1P31327 AP000580.1-201ENST00000404439 358 ntBASIC6.48□□□□□ -1.37
CPS1P31327 RPS29P7-201ENST00000439662 171 ntBASIC6.48□□□□□ -1.37
CPS1P31327 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.48□□□□□ -1.37
CPS1P31327 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.48□□□□□ -1.37
CPS1P31327 RPS27AP13-201ENST00000498403 237 ntBASIC6.48□□□□□ -1.37
CPS1P31327 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CPS1P31327 MRPS21P9-201ENST00000571150 257 ntBASIC6.48□□□□□ -1.37
CPS1P31327 RN7SL435P-201ENST00000584418 282 ntBASIC6.48□□□□□ -1.37
CPS1P31327 Z95327.3-201ENST00000610385 572 ntBASIC6.48□□□□□ -1.37
CPS1P31327 AC084757.4-201ENST00000616350 526 ntBASIC6.48□□□□□ -1.37
CPS1P31327 MIR6875-201ENST00000617506 72 ntBASIC6.48□□□□□ -1.37
CPS1P31327 AC011815.3-201ENST00000624194 473 ntBASIC6.48□□□□□ -1.37
CPS1P31327 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CPS1P31327 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms