Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC13P31276 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HOXC13P31276 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HOXC13P31276 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXC13P31276 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC13P31276 RNU1-32P-201ENST00000363937 159 ntBASIC5.35□□□□□ -1.55
HOXC13P31276 SNORA27.3-201ENST00000364937 134 ntBASIC5.35□□□□□ -1.55
HOXC13P31276 RPL12P9-201ENST00000412942 488 ntBASIC5.35□□□□□ -1.55
HOXC13P31276 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC13P31276 VTI1BP4-201ENST00000427516 527 ntBASIC5.35□□□□□ -1.55
HOXC13P31276 AC009238.2-201ENST00000431026 355 ntBASIC5.35□□□□□ -1.55
HOXC13P31276 AC016712.1-201ENST00000431088 378 ntBASIC5.35□□□□□ -1.55
HOXC13P31276 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC13P31276 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC13P31276 AC021087.2-201ENST00000504656 1203 ntBASIC5.35□□□□□ -1.55
HOXC13P31276 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC13P31276 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC13P31276 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC13P31276 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC13P31276 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC13P31276 AC008033.2-201ENST00000542626 177 ntBASIC5.35□□□□□ -1.55
HOXC13P31276 AC022884.2-201ENST00000578535 580 ntBASIC5.35□□□□□ -1.55
HOXC13P31276 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC13P31276 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC13P31276 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXC13P31276 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC13P31276 AC091905.4-201ENST00000623432 202 ntBASIC5.35□□□□□ -1.55
HOXC13P31276 AL118508.4-201ENST00000624142 1176 ntBASIC5.35□□□□□ -1.55
HOXC13P31276 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC13P31276 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HOXC13P31276 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC13P31276 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC13P31276 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC13P31276 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC13P31276 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC13P31276 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC13P31276 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC13P31276 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC13P31276 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC13P31276 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC13P31276 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
HOXC13P31276 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC13P31276 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC13P31276 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC13P31276 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC13P31276 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC13P31276 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HOXC13P31276 CYP1D1P-201ENST00000416662 1433 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC13P31276 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC13P31276 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC13P31276 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
HOXC13P31276 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HOXC13P31276 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC13P31276 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HOXC13P31276 RNU6-398P-201ENST00000384143 109 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 MIR600-201ENST00000385007 98 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC13P31276 COX5BP7-201ENST00000414780 274 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC13P31276 AC073464.3-201ENST00000422564 712 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 AC009965.2-201ENST00000425328 970 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 USP9YP9-201ENST00000429406 715 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC13P31276 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC13P31276 RPS29P10-201ENST00000439197 166 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC13P31276 IFNWP4-201ENST00000453148 294 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC13P31276 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC13P31276 AC007688.1-201ENST00000475592 759 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC13P31276 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC13P31276 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC13P31276 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.34□□□□□ -1.55
HOXC13P31276 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.34□□□□□ -1.55
HOXC13P31276 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC13P31276 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC13P31276 AC021006.3-201ENST00000530771 192 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC13P31276 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC13P31276 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC13P31276 HNRNPCP4-201ENST00000571636 900 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 AC027216.1-201ENST00000577726 685 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC13P31276 PRPF19P1-201ENST00000584766 898 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 VN1R84P-201ENST00000593697 235 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 AC133552.5-201ENST00000604266 540 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 AL391834.1-201ENST00000609609 560 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 AC139769.3-201ENST00000618383 175 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 AC091932.2-201ENST00000623014 291 ntBASIC5.34□□□□□ -1.55
HOXC13P31276 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
HOXC13P31276 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC13P31276 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC13P31276 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC13P31276 AL592437.2-201ENST00000421655 2434 ntBASIC5.34□□□□□ -1.56
HOXC13P31276 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC13P31276 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC13P31276 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HOXC13P31276 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms