Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.41□□□□□ -1.22
RXRBP28702 FAM133DP-201ENST00000464802 691 ntBASIC7.41□□□□□ -1.22
RXRBP28702 RN7SL41P-201ENST00000476144 297 ntBASIC7.41□□□□□ -1.22
RXRBP28702 TPT1P3-201ENST00000492841 512 ntBASIC7.41□□□□□ -1.22
RXRBP28702 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC7.41□□□□□ -1.22
RXRBP28702 AC026402.1-201ENST00000513642 170 ntBASIC7.41□□□□□ -1.22
RXRBP28702 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC7.41□□□□□ -1.22
RXRBP28702 AC067904.2-201ENST00000517322 1283 ntBASIC7.41□□□□□ -1.22
RXRBP28702 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.41□□□□□ -1.22
RXRBP28702 PTK2-220ENST00000520151 573 ntTSL 4 BASIC7.41□□□□□ -1.22
RXRBP28702 AC078899.1-201ENST00000521432 1185 ntBASIC7.41□□□□□ -1.22
RXRBP28702 OR8I1P-201ENST00000529291 931 ntBASIC7.41□□□□□ -1.22
RXRBP28702 ASB8-204ENST00000536071 568 ntTSL 4 BASIC7.41□□□□□ -1.22
RXRBP28702 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.41□□□□□ -1.22
RXRBP28702 CDC42EP3P1-201ENST00000601004 764 ntBASIC7.41□□□□□ -1.22
RXRBP28702 AL031320.1-201ENST00000604177 357 ntBASIC7.41□□□□□ -1.22
RXRBP28702 AP002360.3-201ENST00000607673 710 ntBASIC7.41□□□□□ -1.22
RXRBP28702 AC091965.4-201ENST00000607691 587 ntBASIC7.41□□□□□ -1.22
RXRBP28702 AL138478.1-201ENST00000612252 832 ntBASIC7.41□□□□□ -1.22
RXRBP28702 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.41□□□□□ -1.22
RXRBP28702 AC068724.3-201ENST00000625906 87 ntBASIC7.41□□□□□ -1.22
RXRBP28702 AC135068.12-201ENST00000637370 931 ntBASIC7.41□□□□□ -1.22
RXRBP28702 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RXRBP28702 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RXRBP28702 AC016251.2-201ENST00000623393 3089 ntBASIC7.41□□□□□ -1.22
RXRBP28702 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.41□□□□□ -1.22
RXRBP28702 AC004520.1-201ENST00000608362 1413 ntBASIC7.41□□□□□ -1.22
RXRBP28702 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RXRBP28702 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RXRBP28702 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
RXRBP28702 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC7.41□□□□□ -1.22
RXRBP28702 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RXRBP28702 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
RXRBP28702 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.4□□□□□ -1.22
RXRBP28702 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.4□□□□□ -1.22
RXRBP28702 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
RXRBP28702 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RXRBP28702 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
RXRBP28702 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RXRBP28702 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RXRBP28702 RANP4-201ENST00000413361 655 ntBASIC7.4□□□□□ -1.22
RXRBP28702 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.4□□□□□ -1.22
RXRBP28702 OR2AM1P-201ENST00000422137 422 ntBASIC7.4□□□□□ -1.22
RXRBP28702 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC7.4□□□□□ -1.22
RXRBP28702 HSPD1P12-201ENST00000429127 1069 ntBASIC7.4□□□□□ -1.22
RXRBP28702 FGF7P5-201ENST00000441829 291 ntBASIC7.4□□□□□ -1.22
RXRBP28702 AC011742.2-201ENST00000443818 352 ntBASIC7.4□□□□□ -1.22
RXRBP28702 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC7.4□□□□□ -1.22
RXRBP28702 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.4□□□□□ -1.22
RXRBP28702 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC7.4□□□□□ -1.22
RXRBP28702 AC116353.2-201ENST00000505332 712 ntBASIC7.4□□□□□ -1.22
RXRBP28702 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC7.4□□□□□ -1.22
RXRBP28702 PGBD4P4-201ENST00000509673 613 ntBASIC7.4□□□□□ -1.22
RXRBP28702 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.4□□□□□ -1.22
RXRBP28702 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
RXRBP28702 PDCL2P2-201ENST00000533651 189 ntBASIC7.4□□□□□ -1.22
RXRBP28702 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC7.4□□□□□ -1.22
RXRBP28702 AC025918.2-201ENST00000558683 763 ntBASIC7.4□□□□□ -1.22
RXRBP28702 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7.4□□□□□ -1.22
RXRBP28702 AC107993.1-201ENST00000591343 684 ntBASIC7.4□□□□□ -1.22
RXRBP28702 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC7.4□□□□□ -1.22
RXRBP28702 AP001330.5-201ENST00000607176 411 ntBASIC7.4□□□□□ -1.22
RXRBP28702 AC108747.1-201ENST00000609508 535 ntBASIC7.4□□□□□ -1.22
RXRBP28702 AC122133.1-201ENST00000613964 233 ntBASIC7.4□□□□□ -1.22
RXRBP28702 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RXRBP28702 RBM12B-AS1-201ENST00000623283 653 ntBASIC7.4□□□□□ -1.22
RXRBP28702 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.4□□□□□ -1.22
RXRBP28702 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.4□□□□□ -1.22
RXRBP28702 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RXRBP28702 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
RXRBP28702 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
RXRBP28702 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RXRBP28702 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RXRBP28702 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RXRBP28702 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RXRBP28702 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RXRBP28702 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
RXRBP28702 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RXRBP28702 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RXRBP28702 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.39□□□□□ -1.23
RXRBP28702 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RXRBP28702 AC005225.5-201ENST00000623547 2225 ntBASIC7.39□□□□□ -1.23
RXRBP28702 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.39□□□□□ -1.23
RXRBP28702 AC005034.3-201ENST00000604845 1747 ntBASIC7.39□□□□□ -1.23
RXRBP28702 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RXRBP28702 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RXRBP28702 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RXRBP28702 FHIT-201ENST00000341848 174 ntTSL 3 BASIC7.39□□□□□ -1.23
RXRBP28702 Y_RNA.553-201ENST00000384670 102 ntBASIC7.39□□□□□ -1.23
RXRBP28702 snosnR66.1-201ENST00000391095 99 ntBASIC7.39□□□□□ -1.23
RXRBP28702 AL078599.1-201ENST00000402075 293 ntBASIC7.39□□□□□ -1.23
RXRBP28702 RPS6P23-201ENST00000413224 722 ntBASIC7.39□□□□□ -1.23
RXRBP28702 PRUNEP1-201ENST00000425846 705 ntBASIC7.39□□□□□ -1.23
RXRBP28702 AC021876.1-201ENST00000425959 359 ntBASIC7.39□□□□□ -1.23
RXRBP28702 NPM1P26-201ENST00000426339 738 ntBASIC7.39□□□□□ -1.23
RXRBP28702 AC004975.1-201ENST00000428733 208 ntBASIC7.39□□□□□ -1.23
RXRBP28702 AL365220.1-201ENST00000432923 399 ntBASIC7.39□□□□□ -1.23
RXRBP28702 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.39□□□□□ -1.23
RXRBP28702 RPS3AP38-201ENST00000435889 763 ntBASIC7.39□□□□□ -1.23
RXRBP28702 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms