Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MTATP6P31-201ENST00000406985 692 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.04□□□□□ -1.6
ABCD3P28288 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.04□□□□□ -1.6
ABCD3P28288 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.04□□□□□ -1.6
ABCD3P28288 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ABCD3P28288 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.04□□□□□ -1.6
ABCD3P28288 AC105399.1-202ENST00000447303 205 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 EIF4A1P11-201ENST00000451239 222 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 AL606490.1-201ENST00000452266 765 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 DNAJC19P8-201ENST00000452887 259 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.04□□□□□ -1.6
ABCD3P28288 PPIAP21-201ENST00000464473 501 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.04□□□□□ -1.6
ABCD3P28288 AC006511.1-201ENST00000470614 315 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ABCD3P28288 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.04□□□□□ -1.6
ABCD3P28288 AC098799.3-201ENST00000506095 438 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ABCD3P28288 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.04□□□□□ -1.6
ABCD3P28288 HMGB1P23-201ENST00000518743 568 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.04□□□□□ -1.6
ABCD3P28288 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.04□□□□□ -1.6
ABCD3P28288 AC006518.2-201ENST00000542513 940 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ABCD3P28288 AL359219.2-201ENST00000555184 348 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.04□□□□□ -1.6
ABCD3P28288 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.04□□□□□ -1.6
ABCD3P28288 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.04□□□□□ -1.6
ABCD3P28288 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.04□□□□□ -1.6
ABCD3P28288 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.04□□□□□ -1.6
ABCD3P28288 SUGT1P3-202ENST00000604259 383 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
ABCD3P28288 BNIP3P4-201ENST00000604946 565 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.04□□□□□ -1.6
ABCD3P28288 AC000068.2-201ENST00000608816 460 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.04□□□□□ -1.6
ABCD3P28288 AC007204.2-201ENST00000615022 616 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 MIR6729-201ENST00000618194 65 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.04□□□□□ -1.6
ABCD3P28288 AC015908.5-201ENST00000623289 343 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ABCD3P28288 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
ABCD3P28288 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ABCD3P28288 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ABCD3P28288 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ABCD3P28288 AC002525.1-201ENST00000624392 1622 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ABCD3P28288 AC006206.1-201ENST00000544842 3387 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.04□□□□□ -1.6
ABCD3P28288 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
ABCD3P28288 AC079097.1-201ENST00000512187 1399 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
ABCD3P28288 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ABCD3P28288 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ABCD3P28288 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.03□□□□□ -1.6
ABCD3P28288 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.03□□□□□ -1.6
ABCD3P28288 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ABCD3P28288 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ABCD3P28288 RN7SKP160-201ENST00000363804 340 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
ABCD3P28288 SNORA16A-201ENST00000384342 137 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 AC092638.1-201ENST00000411966 1275 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 AC079355.1-201ENST00000421770 223 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 HSFY1P1-201ENST00000423928 1178 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.03□□□□□ -1.6
ABCD3P28288 AC138761.5-201ENST00000433967 325 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 MTND2P40-201ENST00000436718 841 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.03□□□□□ -1.6
ABCD3P28288 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.03□□□□□ -1.6
ABCD3P28288 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.03□□□□□ -1.6
ABCD3P28288 AC073465.2-201ENST00000440938 498 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 SPRYD7P1-201ENST00000443861 570 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 AL929288.2-201ENST00000446368 407 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 AC083899.1-201ENST00000454465 3819 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.03□□□□□ -1.6
ABCD3P28288 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
ABCD3P28288 AC108693.1-201ENST00000496068 432 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 AC023050.1-201ENST00000498198 304 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 PRELID3BP6-201ENST00000503839 571 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ABCD3P28288 AC021106.1-201ENST00000509020 1058 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.03□□□□□ -1.6
ABCD3P28288 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.03□□□□□ -1.6
ABCD3P28288 RPL7L1P4-201ENST00000513004 707 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 SCARNA16.4-201ENST00000516956 187 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 RN7SKP283-201ENST00000517197 270 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.03□□□□□ -1.6
ABCD3P28288 AC079064.1-201ENST00000528365 362 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 OR4A43P-201ENST00000532938 908 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.03□□□□□ -1.6
ABCD3P28288 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.03□□□□□ -1.6
ABCD3P28288 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.03□□□□□ -1.6
ABCD3P28288 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.03□□□□□ -1.6
ABCD3P28288 ZNF971P-201ENST00000562068 1249 ntBASIC5.03□□□□□ -1.6
ABCD3P28288 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.03□□□□□ -1.6
ABCD3P28288 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.03□□□□□ -1.6
ABCD3P28288 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.03□□□□□ -1.6
ABCD3P28288 AC245884.10-201ENST00000597355 337 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms