Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNA5SP478-201ENST00000364657 115 ntBASIC5.44□□□□□ -1.54
CD40P25942 MIR92A2-201ENST00000385299 75 ntBASIC5.44□□□□□ -1.54
CD40P25942 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CD40P25942 AL078595.1-201ENST00000404458 226 ntBASIC5.44□□□□□ -1.54
CD40P25942 RN7SKP121-201ENST00000410842 305 ntBASIC5.44□□□□□ -1.54
CD40P25942 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.44□□□□□ -1.54
CD40P25942 AC007899.1-201ENST00000412776 775 ntBASIC5.44□□□□□ -1.54
CD40P25942 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.44□□□□□ -1.54
CD40P25942 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CD40P25942 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.44□□□□□ -1.54
CD40P25942 AC233981.1-201ENST00000423224 461 ntBASIC5.44□□□□□ -1.54
CD40P25942 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.44□□□□□ -1.54
CD40P25942 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CD40P25942 RPS7P14-201ENST00000426405 583 ntBASIC5.44□□□□□ -1.54
CD40P25942 C8orf59P1-201ENST00000429930 303 ntBASIC5.44□□□□□ -1.54
CD40P25942 UBE2FP3-201ENST00000436366 524 ntBASIC5.44□□□□□ -1.54
CD40P25942 AC241584.1-201ENST00000438469 1241 ntBASIC5.44□□□□□ -1.54
CD40P25942 AL512286.1-201ENST00000439244 400 ntBASIC5.44□□□□□ -1.54
CD40P25942 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.44□□□□□ -1.54
CD40P25942 AMYP1-201ENST00000440059 1023 ntBASIC5.44□□□□□ -1.54
CD40P25942 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.44□□□□□ -1.54
CD40P25942 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.44□□□□□ -1.54
CD40P25942 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CD40P25942 HIGD1AP16-201ENST00000450986 258 ntBASIC5.44□□□□□ -1.54
CD40P25942 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.44□□□□□ -1.54
CD40P25942 SEPT7P3-201ENST00000455017 621 ntBASIC5.44□□□□□ -1.54
CD40P25942 Z83838.1-202ENST00000456225 839 ntBASIC5.44□□□□□ -1.54
CD40P25942 RPL7P16-201ENST00000479738 738 ntBASIC5.44□□□□□ -1.54
CD40P25942 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.44□□□□□ -1.54
CD40P25942 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.44□□□□□ -1.54
CD40P25942 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CD40P25942 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.44□□□□□ -1.54
CD40P25942 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.44□□□□□ -1.54
CD40P25942 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.44□□□□□ -1.54
CD40P25942 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.44□□□□□ -1.54
CD40P25942 PCNPP1-201ENST00000552501 511 ntBASIC5.44□□□□□ -1.54
CD40P25942 HSPE1P2-201ENST00000554777 306 ntBASIC5.44□□□□□ -1.54
CD40P25942 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.44□□□□□ -1.54
CD40P25942 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.44□□□□□ -1.54
CD40P25942 AC009120.3-201ENST00000563335 499 ntBASIC5.44□□□□□ -1.54
CD40P25942 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.44□□□□□ -1.54
CD40P25942 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CD40P25942 MIR4701-201ENST00000583094 63 ntBASIC5.44□□□□□ -1.54
CD40P25942 KPNA2P3-201ENST00000584190 848 ntBASIC5.44□□□□□ -1.54
CD40P25942 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.44□□□□□ -1.54
CD40P25942 AC017100.2-201ENST00000584628 355 ntBASIC5.44□□□□□ -1.54
CD40P25942 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.44□□□□□ -1.54
CD40P25942 AL596327.1-201ENST00000603629 213 ntBASIC5.44□□□□□ -1.54
CD40P25942 AC023813.4-201ENST00000607580 580 ntBASIC5.44□□□□□ -1.54
CD40P25942 AC092681.3-201ENST00000609463 678 ntBASIC5.44□□□□□ -1.54
CD40P25942 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.44□□□□□ -1.54
CD40P25942 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CD40P25942 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.44□□□□□ -1.54
CD40P25942 AL121873.1-201ENST00000616013 524 ntBASIC5.44□□□□□ -1.54
CD40P25942 FAM27E2-201ENST00000619668 403 ntBASIC5.44□□□□□ -1.54
CD40P25942 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.44□□□□□ -1.54
CD40P25942 AC009120.7-201ENST00000623452 780 ntBASIC5.44□□□□□ -1.54
CD40P25942 AC018628.1-201ENST00000624147 3819 ntBASIC5.44□□□□□ -1.54
CD40P25942 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.44□□□□□ -1.54
CD40P25942 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CD40P25942 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.44□□□□□ -1.54
CD40P25942 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.44□□□□□ -1.54
CD40P25942 AL589993.1-201ENST00000407450 2524 ntBASIC5.44□□□□□ -1.54
CD40P25942 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CD40P25942 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.44□□□□□ -1.54
CD40P25942 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
CD40P25942 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
CD40P25942 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CD40P25942 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CD40P25942 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.44□□□□□ -1.54
CD40P25942 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.44□□□□□ -1.54
CD40P25942 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CD40P25942 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 TCP11X1-202ENST00000622971 1372 ntBASIC5.43□□□□□ -1.54
CD40P25942 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.43□□□□□ -1.54
CD40P25942 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CD40P25942 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 SMG1P7-201ENST00000565246 2704 ntBASIC5.43□□□□□ -1.54
CD40P25942 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.43□□□□□ -1.54
CD40P25942 MTCO1P14-201ENST00000441695 1559 ntBASIC5.43□□□□□ -1.54
CD40P25942 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.43□□□□□ -1.54
CD40P25942 AC025125.1-201ENST00000624743 1922 ntBASIC5.43□□□□□ -1.54
CD40P25942 AC090017.1-201ENST00000548612 1779 ntBASIC5.43□□□□□ -1.54
CD40P25942 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 RNU5F-7P-201ENST00000363696 115 ntBASIC5.43□□□□□ -1.54
CD40P25942 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.43□□□□□ -1.54
CD40P25942 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 MTCO3P31-201ENST00000405526 789 ntBASIC5.43□□□□□ -1.54
CD40P25942 NCSTNP1-201ENST00000406229 144 ntBASIC5.43□□□□□ -1.54
CD40P25942 UBE2V1P10-201ENST00000414685 269 ntBASIC5.43□□□□□ -1.54
CD40P25942 ELOCP17-201ENST00000414751 326 ntBASIC5.43□□□□□ -1.54
CD40P25942 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.43□□□□□ -1.54
CD40P25942 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms