Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TNFSF4P23510 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFSF4P23510 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.15□□□□□ -1.59
TNFSF4P23510 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TNFSF4P23510 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
TNFSF4P23510 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF4P23510 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.14□□□□□ -1.59
TNFSF4P23510 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
TNFSF4P23510 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF4P23510 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TNFSF4P23510 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.14□□□□□ -1.59
TNFSF4P23510 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AC016583.1-201ENST00000624221 2431 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AC120338.1-201ENST00000625074 1541 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF4P23510 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF4P23510 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF4P23510 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFSF4P23510 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF4P23510 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFSF4P23510 SUGT1P1-201ENST00000379514 476 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF4P23510 AC004386.1-201ENST00000393214 761 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 FABP12P1-201ENST00000401911 322 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 MTCO3P31-201ENST00000405526 789 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFSF4P23510 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AL358176.3-201ENST00000420757 454 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 NMD3P2-201ENST00000421815 761 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFSF4P23510 USP9YP11-201ENST00000427537 717 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 AL513175.1-201ENST00000431492 780 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFSF4P23510 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFSF4P23510 Z77249.1-201ENST00000444622 1175 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 GEMIN8P3-201ENST00000445417 720 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AC005077.1-201ENST00000449226 375 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 OR52E7P-201ENST00000452394 933 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 NECAP1P2-201ENST00000455668 727 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 ACA64.1-201ENST00000459171 127 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 AC087672.1-201ENST00000479876 766 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFSF4P23510 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFSF4P23510 RN7SKP238-201ENST00000516483 249 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 WBP1LP3-201ENST00000523033 208 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFSF4P23510 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AC004825.1-201ENST00000555068 586 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 MTND3P12-201ENST00000559068 328 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 AC090888.2-201ENST00000559765 1144 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 AC087465.1-201ENST00000560574 245 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AL354943.1-201ENST00000572103 781 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFSF4P23510 RNU4ATAC-201ENST00000580972 127 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.14□□□□□ -1.59
TNFSF4P23510 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFSF4P23510 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFSF4P23510 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AC090948.2-201ENST00000607363 564 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 AL451074.6-201ENST00000608512 729 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 AC079416.3-201ENST00000624479 549 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AC026634.1-201ENST00000634369 198 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 AC068620.4-201ENST00000636730 1182 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF4P23510 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF4P23510 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF4P23510 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF4P23510 THAP12P9-201ENST00000503971 2360 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TNFSF4P23510 AC008627.1-201ENST00000517511 1704 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 AC110373.1-201ENST00000505994 3505 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 RBPJP7-201ENST00000442803 1447 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 RBPJP5-201ENST00000449433 1447 ntBASIC5.14□□□□□ -1.59
TNFSF4P23510 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.14□□□□□ -1.59
TNFSF4P23510 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TNFSF4P23510 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TNFSF4P23510 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TNFSF4P23510 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TNFSF4P23510 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TNFSF4P23510 AC006210.2-201ENST00000367074 1545 ntBASIC5.13□□□□□ -1.59
TNFSF4P23510 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TNFSF4P23510 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
TNFSF4P23510 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
TNFSF4P23510 AC093535.2-201ENST00000624769 2326 ntBASIC5.13□□□□□ -1.59
TNFSF4P23510 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
TNFSF4P23510 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms