Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.8□□□□□ -1.64
XRCC1P18887 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.8□□□□□ -1.64
XRCC1P18887 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.8□□□□□ -1.64
XRCC1P18887 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.8□□□□□ -1.64
XRCC1P18887 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
XRCC1P18887 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.8□□□□□ -1.64
XRCC1P18887 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.8□□□□□ -1.64
XRCC1P18887 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.8□□□□□ -1.64
XRCC1P18887 AC067838.1-201ENST00000606064 577 ntBASIC4.8□□□□□ -1.64
XRCC1P18887 AC019206.1-201ENST00000621938 425 ntBASIC4.8□□□□□ -1.64
XRCC1P18887 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.8□□□□□ -1.64
XRCC1P18887 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
XRCC1P18887 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
XRCC1P18887 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
XRCC1P18887 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
XRCC1P18887 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
XRCC1P18887 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
XRCC1P18887 CASC19-206ENST00000641028 1430 ntBASIC4.8□□□□□ -1.64
XRCC1P18887 OR10AB1P-202ENST00000641219 1686 ntBASIC4.8□□□□□ -1.64
XRCC1P18887 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
XRCC1P18887 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
XRCC1P18887 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.79□□□□□ -1.64
XRCC1P18887 LINC01355-201ENST00000566551 5444 ntBASIC4.79□□□□□ -1.64
XRCC1P18887 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
XRCC1P18887 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
XRCC1P18887 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
XRCC1P18887 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
XRCC1P18887 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
XRCC1P18887 MIR365B-201ENST00000362317 111 ntBASIC4.79□□□□□ -1.64
XRCC1P18887 SNORD96B-201ENST00000386148 79 ntBASIC4.79□□□□□ -1.64
XRCC1P18887 RPL37P18-201ENST00000411602 243 ntBASIC4.79□□□□□ -1.64
XRCC1P18887 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.79□□□□□ -1.64
XRCC1P18887 EIF4HP2-201ENST00000424380 563 ntBASIC4.79□□□□□ -1.64
XRCC1P18887 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
XRCC1P18887 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.79□□□□□ -1.64
XRCC1P18887 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.79□□□□□ -1.64
XRCC1P18887 RAB28P3-201ENST00000448325 597 ntBASIC4.79□□□□□ -1.64
XRCC1P18887 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.79□□□□□ -1.64
XRCC1P18887 AC063943.1-201ENST00000465434 453 ntBASIC4.79□□□□□ -1.64
XRCC1P18887 RPL7AP10-201ENST00000481016 791 ntBASIC4.79□□□□□ -1.64
XRCC1P18887 OR9N1P-201ENST00000491296 333 ntBASIC4.79□□□□□ -1.64
XRCC1P18887 AGGF1P3-201ENST00000493675 1213 ntBASIC4.79□□□□□ -1.64
XRCC1P18887 RN7SKP34-201ENST00000516142 244 ntBASIC4.79□□□□□ -1.64
XRCC1P18887 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.79□□□□□ -1.64
XRCC1P18887 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.79□□□□□ -1.64
XRCC1P18887 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.79□□□□□ -1.64
XRCC1P18887 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.79□□□□□ -1.64
XRCC1P18887 UBE2FP2-201ENST00000566646 462 ntBASIC4.79□□□□□ -1.64
XRCC1P18887 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.79□□□□□ -1.64
XRCC1P18887 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.79□□□□□ -1.64
XRCC1P18887 AL391358.1-201ENST00000605342 190 ntBASIC4.79□□□□□ -1.64
XRCC1P18887 AL159169.2-201ENST00000610061 1269 ntBASIC4.79□□□□□ -1.64
XRCC1P18887 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.79□□□□□ -1.64
XRCC1P18887 AL158062.1-201ENST00000619632 745 ntBASIC4.79□□□□□ -1.64
XRCC1P18887 AP001005.3-201ENST00000622049 129 ntBASIC4.79□□□□□ -1.64
XRCC1P18887 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.79□□□□□ -1.64
XRCC1P18887 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.79□□□□□ -1.64
XRCC1P18887 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.79□□□□□ -1.64
XRCC1P18887 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.79□□□□□ -1.64
XRCC1P18887 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
XRCC1P18887 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.79□□□□□ -1.64
XRCC1P18887 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.79□□□□□ -1.64
XRCC1P18887 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
XRCC1P18887 MAPK10-263ENST00000641052 4307 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.78□□□□□ -1.64
XRCC1P18887 SAMMSON-226ENST00000642089 1582 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.78□□□□□ -1.64
XRCC1P18887 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
XRCC1P18887 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.78□□□□□ -1.64
XRCC1P18887 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
XRCC1P18887 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
XRCC1P18887 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
XRCC1P18887 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
XRCC1P18887 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.78□□□□□ -1.64
XRCC1P18887 SNORA73.1-201ENST00000363107 205 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 AL672167.2-201ENST00000377164 879 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 RNA5SP113-201ENST00000410486 84 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
XRCC1P18887 FABP7P1-201ENST00000424004 391 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 AC097523.2-201ENST00000435551 652 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.78□□□□□ -1.64
XRCC1P18887 SCAND3P1-201ENST00000439854 1060 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 AC073052.1-201ENST00000440417 714 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 ARAFP2-201ENST00000440565 559 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 Z80107.2-201ENST00000445127 392 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 AL591363.1-201ENST00000450091 483 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 AURKAPS2-201ENST00000454983 333 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 RNU6-775P-201ENST00000459318 96 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 AC116562.1-201ENST00000485355 781 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.78□□□□□ -1.64
XRCC1P18887 RNU6-551P-201ENST00000516661 103 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 IGKV1-32-201ENST00000519290 311 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 MORF4L1P3-201ENST00000525966 950 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
XRCC1P18887 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.78□□□□□ -1.64
XRCC1P18887 AC008147.3-201ENST00000548666 354 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.78□□□□□ -1.64
XRCC1P18887 MIR3667-201ENST00000581025 74 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 AC020915.5-201ENST00000596836 964 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms