Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC6P09630 AL356981.1-201ENST00000454879 684 ntBASIC5.55□□□□□ -1.52
HOXC6P09630 RPS17P2-201ENST00000461663 408 ntBASIC5.55□□□□□ -1.52
HOXC6P09630 AC016550.1-201ENST00000505348 785 ntBASIC5.55□□□□□ -1.52
HOXC6P09630 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC6P09630 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HOXC6P09630 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.55□□□□□ -1.52
HOXC6P09630 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC6P09630 Y_RNA.719-201ENST00000517156 106 ntBASIC5.55□□□□□ -1.52
HOXC6P09630 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.55□□□□□ -1.52
HOXC6P09630 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC6P09630 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.55□□□□□ -1.52
HOXC6P09630 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC6P09630 AL110118.1-201ENST00000553543 400 ntBASIC5.55□□□□□ -1.52
HOXC6P09630 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC6P09630 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.55□□□□□ -1.52
HOXC6P09630 AC106785.3-201ENST00000564064 847 ntBASIC5.55□□□□□ -1.52
HOXC6P09630 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC6P09630 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC6P09630 AC022726.1-201ENST00000587475 207 ntBASIC5.55□□□□□ -1.52
HOXC6P09630 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.55□□□□□ -1.52
HOXC6P09630 AC096947.1-201ENST00000603233 470 ntBASIC5.55□□□□□ -1.52
HOXC6P09630 ABI1P1-201ENST00000603375 1120 ntBASIC5.55□□□□□ -1.52
HOXC6P09630 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC6P09630 AC241377.1-201ENST00000619797 406 ntBASIC5.55□□□□□ -1.52
HOXC6P09630 AP006248.3-201ENST00000623580 594 ntBASIC5.55□□□□□ -1.52
HOXC6P09630 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC6P09630 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC6P09630 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC6P09630 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
HOXC6P09630 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC6P09630 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC6P09630 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC6P09630 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HOXC6P09630 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC6P09630 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC6P09630 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC6P09630 AC093297.3-201ENST00000607056 2517 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HOXC6P09630 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC6P09630 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC6P09630 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC6P09630 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC6P09630 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC6P09630 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
HOXC6P09630 AC109446.4-201ENST00000623235 2755 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC6P09630 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC6P09630 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC6P09630 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HOXC6P09630 RNA5SP397-201ENST00000391323 118 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HOXC6P09630 TBCAP2-201ENST00000416175 326 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC6P09630 AC006065.1-201ENST00000422539 802 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 AL732292.1-201ENST00000426692 226 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC6P09630 RPL5P2-201ENST00000429598 854 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 AC046176.1-201ENST00000435260 1170 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC6P09630 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC6P09630 AC000111.2-201ENST00000448200 210 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 OR6C72P-201ENST00000451403 892 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 AL161747.1-201ENST00000480068 358 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 OR2A3P-201ENST00000493774 953 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 AC114322.1-201ENST00000506771 926 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXC6P09630 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC6P09630 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXC6P09630 AC138701.1-201ENST00000524329 714 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC6P09630 NPM1P5-201ENST00000557228 838 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 AC011270.1-201ENST00000558606 583 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXC6P09630 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC6P09630 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC6P09630 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC6P09630 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC6P09630 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC6P09630 FAM27B-201ENST00000610601 213 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 AL050303.3-201ENST00000613704 284 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 AL049794.2-201ENST00000616301 365 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 AC090772.4-201ENST00000623599 362 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC6P09630 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC6P09630 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC6P09630 MUC2-202ENST00000613187 4845 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC6P09630 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HOXC6P09630 SMG1P7-201ENST00000565246 2704 ntBASIC5.54□□□□□ -1.52
HOXC6P09630 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
HOXC6P09630 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC6P09630 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC6P09630 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC6P09630 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HOXC6P09630 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC6P09630 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC6P09630 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC6P09630 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
HOXC6P09630 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms