Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
APOA1P02647 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC4.26□□□□□ -1.73
APOA1P02647 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
APOA1P02647 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
APOA1P02647 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
APOA1P02647 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.26□□□□□ -1.73
APOA1P02647 AC130352.1-201ENST00000602979 661 ntBASIC4.26□□□□□ -1.73
APOA1P02647 AC022001.1-201ENST00000605193 268 ntBASIC4.26□□□□□ -1.73
APOA1P02647 AC020634.1-201ENST00000608701 549 ntBASIC4.26□□□□□ -1.73
APOA1P02647 AL049794.2-201ENST00000616301 365 ntBASIC4.26□□□□□ -1.73
APOA1P02647 AC103858.2-201ENST00000621471 543 ntBASIC4.26□□□□□ -1.73
APOA1P02647 FO681491.1-202ENST00000623392 737 ntBASIC4.26□□□□□ -1.73
APOA1P02647 TEX41-279ENST00000629149 609 ntTSL 5 BASIC4.26□□□□□ -1.73
APOA1P02647 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
APOA1P02647 AC006453.5-201ENST00000636451 619 ntBASIC4.26□□□□□ -1.73
APOA1P02647 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
APOA1P02647 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
APOA1P02647 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.26□□□□□ -1.73
APOA1P02647 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
APOA1P02647 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
APOA1P02647 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.26□□□□□ -1.73
APOA1P02647 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
APOA1P02647 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.26□□□□□ -1.73
APOA1P02647 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
APOA1P02647 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
APOA1P02647 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
APOA1P02647 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
APOA1P02647 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
APOA1P02647 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
APOA1P02647 OR52B3P-201ENST00000314715 928 ntBASIC4.25□□□□□ -1.73
APOA1P02647 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
APOA1P02647 RNA5SP122-201ENST00000384457 108 ntBASIC4.25□□□□□ -1.73
APOA1P02647 GABARAPL3-201ENST00000412799 354 ntBASIC4.25□□□□□ -1.73
APOA1P02647 AC006065.1-201ENST00000422539 802 ntBASIC4.25□□□□□ -1.73
APOA1P02647 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
APOA1P02647 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.25□□□□□ -1.73
APOA1P02647 BX323845.1-201ENST00000432417 179 ntBASIC4.25□□□□□ -1.73
APOA1P02647 RPS6P12-201ENST00000432491 726 ntBASIC4.25□□□□□ -1.73
APOA1P02647 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.25□□□□□ -1.73
APOA1P02647 RPL7P33-201ENST00000444159 742 ntBASIC4.25□□□□□ -1.73
APOA1P02647 TIMM8BP2-201ENST00000445940 251 ntBASIC4.25□□□□□ -1.73
APOA1P02647 CCRL1P1-201ENST00000449542 1053 ntBASIC4.25□□□□□ -1.73
APOA1P02647 AL451050.1-201ENST00000450126 415 ntBASIC4.25□□□□□ -1.73
APOA1P02647 AL133445.1-201ENST00000467051 452 ntBASIC4.25□□□□□ -1.73
APOA1P02647 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.25□□□□□ -1.73
APOA1P02647 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.25□□□□□ -1.73
APOA1P02647 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.25□□□□□ -1.73
APOA1P02647 AC138866.2-201ENST00000508650 584 ntBASIC4.25□□□□□ -1.73
APOA1P02647 AC006499.6-201ENST00000511169 607 ntBASIC4.25□□□□□ -1.73
APOA1P02647 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.25□□□□□ -1.73
APOA1P02647 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
APOA1P02647 AC008694.2-201ENST00000517591 306 ntBASIC4.25□□□□□ -1.73
APOA1P02647 AC026688.1-201ENST00000520639 1168 ntBASIC4.25□□□□□ -1.73
APOA1P02647 AC090281.1-201ENST00000523019 276 ntBASIC4.25□□□□□ -1.73
APOA1P02647 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.25□□□□□ -1.73
APOA1P02647 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.25□□□□□ -1.73
APOA1P02647 BTG1P1-201ENST00000540396 508 ntBASIC4.25□□□□□ -1.73
APOA1P02647 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.25□□□□□ -1.73
APOA1P02647 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.25□□□□□ -1.73
APOA1P02647 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
APOA1P02647 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.25□□□□□ -1.73
APOA1P02647 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.25□□□□□ -1.73
APOA1P02647 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.25□□□□□ -1.73
APOA1P02647 HMGB2P1-201ENST00000591146 634 ntBASIC4.25□□□□□ -1.73
APOA1P02647 AL096803.3-201ENST00000609032 532 ntBASIC4.25□□□□□ -1.73
APOA1P02647 OR6R2P-201ENST00000609216 300 ntBASIC4.25□□□□□ -1.73
APOA1P02647 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.25□□□□□ -1.73
APOA1P02647 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.25□□□□□ -1.73
APOA1P02647 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
APOA1P02647 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
APOA1P02647 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
APOA1P02647 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
APOA1P02647 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.25□□□□□ -1.73
APOA1P02647 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.25□□□□□ -1.73
APOA1P02647 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.25□□□□□ -1.73
APOA1P02647 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.25□□□□□ -1.73
APOA1P02647 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
APOA1P02647 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOA1P02647 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
APOA1P02647 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.24□□□□□ -1.73
APOA1P02647 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOA1P02647 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
APOA1P02647 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
APOA1P02647 RNA5SP502-201ENST00000362694 119 ntBASIC4.24□□□□□ -1.73
APOA1P02647 RNU1-149P-201ENST00000390870 161 ntBASIC4.24□□□□□ -1.73
APOA1P02647 RNA5SP339-201ENST00000390987 122 ntBASIC4.24□□□□□ -1.73
APOA1P02647 RN7SKP240-201ENST00000410583 375 ntBASIC4.24□□□□□ -1.73
APOA1P02647 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.24□□□□□ -1.73
APOA1P02647 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.24□□□□□ -1.73
APOA1P02647 VN1R37P-201ENST00000419096 748 ntBASIC4.24□□□□□ -1.73
APOA1P02647 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.24□□□□□ -1.73
APOA1P02647 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.24□□□□□ -1.73
APOA1P02647 AC005229.2-201ENST00000456995 399 ntBASIC4.24□□□□□ -1.73
APOA1P02647 S100A11P1-201ENST00000477525 312 ntBASIC4.24□□□□□ -1.73
APOA1P02647 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.24□□□□□ -1.73
APOA1P02647 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.24□□□□□ -1.73
APOA1P02647 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.24□□□□□ -1.73
APOA1P02647 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.24□□□□□ -1.73
APOA1P02647 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.24□□□□□ -1.73
APOA1P02647 AC006512.2-201ENST00000543250 486 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms