Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL2A1P02458 UBE2V2P4-201ENST00000447495 259 ntBASIC5.39□□□□□ -1.55
COL2A1P02458 AC053481.1-201ENST00000467217 306 ntBASIC5.39□□□□□ -1.55
COL2A1P02458 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.39□□□□□ -1.55
COL2A1P02458 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL2A1P02458 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.39□□□□□ -1.55
COL2A1P02458 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.39□□□□□ -1.55
COL2A1P02458 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.39□□□□□ -1.55
COL2A1P02458 AC006130.2-201ENST00000586202 326 ntBASIC5.39□□□□□ -1.55
COL2A1P02458 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.39□□□□□ -1.55
COL2A1P02458 AC023762.1-201ENST00000603280 584 ntBASIC5.39□□□□□ -1.55
COL2A1P02458 AC006133.1-201ENST00000617106 264 ntBASIC5.39□□□□□ -1.55
COL2A1P02458 ZYXP1-201ENST00000617638 118 ntBASIC5.39□□□□□ -1.55
COL2A1P02458 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
COL2A1P02458 STX3-208ENST00000641815 3236 ntBASIC5.39□□□□□ -1.55
COL2A1P02458 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.39□□□□□ -1.55
COL2A1P02458 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.39□□□□□ -1.55
COL2A1P02458 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.39□□□□□ -1.55
COL2A1P02458 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL2A1P02458 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL2A1P02458 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL2A1P02458 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL2A1P02458 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
COL2A1P02458 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL2A1P02458 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL2A1P02458 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL2A1P02458 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL2A1P02458 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL2A1P02458 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL2A1P02458 MIR208A-201ENST00000362287 71 ntBASIC5.39□□□□□ -1.55
COL2A1P02458 RN7SKP224-201ENST00000364140 325 ntBASIC5.39□□□□□ -1.55
COL2A1P02458 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.39□□□□□ -1.55
COL2A1P02458 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.39□□□□□ -1.55
COL2A1P02458 MRPL48P1-201ENST00000445390 636 ntBASIC5.39□□□□□ -1.55
COL2A1P02458 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.39□□□□□ -1.55
COL2A1P02458 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.39□□□□□ -1.55
COL2A1P02458 AL049829.1-201ENST00000465411 156 ntBASIC5.39□□□□□ -1.55
COL2A1P02458 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.39□□□□□ -1.55
COL2A1P02458 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL2A1P02458 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC5.39□□□□□ -1.55
COL2A1P02458 AL158211.2-201ENST00000607282 395 ntBASIC5.39□□□□□ -1.55
COL2A1P02458 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.39□□□□□ -1.55
COL2A1P02458 AL133445.2-201ENST00000611191 527 ntBASIC5.39□□□□□ -1.55
COL2A1P02458 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.39□□□□□ -1.55
COL2A1P02458 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.39□□□□□ -1.55
COL2A1P02458 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
COL2A1P02458 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL2A1P02458 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL2A1P02458 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL2A1P02458 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL2A1P02458 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
COL2A1P02458 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.38□□□□□ -1.55
COL2A1P02458 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL2A1P02458 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
COL2A1P02458 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL2A1P02458 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
COL2A1P02458 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL2A1P02458 CDY3P-201ENST00000454543 1618 ntBASIC5.38□□□□□ -1.55
COL2A1P02458 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.38□□□□□ -1.55
COL2A1P02458 RNU1-130P-201ENST00000363930 160 ntBASIC5.38□□□□□ -1.55
COL2A1P02458 CASKP1-201ENST00000412870 582 ntBASIC5.38□□□□□ -1.55
COL2A1P02458 AL358176.3-201ENST00000420757 454 ntBASIC5.38□□□□□ -1.55
COL2A1P02458 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.38□□□□□ -1.55
COL2A1P02458 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.38□□□□□ -1.55
COL2A1P02458 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.38□□□□□ -1.55
COL2A1P02458 RPL7AP52-201ENST00000458096 790 ntBASIC5.38□□□□□ -1.55
COL2A1P02458 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.38□□□□□ -1.55
COL2A1P02458 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.38□□□□□ -1.55
COL2A1P02458 ACTR6P1-201ENST00000514311 1104 ntBASIC5.38□□□□□ -1.55
COL2A1P02458 IGLVIV-65-201ENST00000517313 360 ntBASIC5.38□□□□□ -1.55
COL2A1P02458 AC026616.1-201ENST00000523157 525 ntBASIC5.38□□□□□ -1.55
COL2A1P02458 AC087272.1-201ENST00000523624 533 ntBASIC5.38□□□□□ -1.55
COL2A1P02458 MIR3138-201ENST00000585238 82 ntBASIC5.38□□□□□ -1.55
COL2A1P02458 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.38□□□□□ -1.55
COL2A1P02458 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.38□□□□□ -1.55
COL2A1P02458 MIR6891-201ENST00000618788 93 ntBASIC5.38□□□□□ -1.55
COL2A1P02458 AC006065.6-201ENST00000625201 545 ntBASIC5.38□□□□□ -1.55
COL2A1P02458 CYP1D1P-201ENST00000416662 1433 ntBASIC5.38□□□□□ -1.55
COL2A1P02458 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
COL2A1P02458 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL2A1P02458 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.37□□□□□ -1.55
COL2A1P02458 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL2A1P02458 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.37□□□□□ -1.55
COL2A1P02458 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL2A1P02458 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.37□□□□□ -1.55
COL2A1P02458 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL2A1P02458 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL2A1P02458 RN7SKP280-201ENST00000364196 304 ntBASIC5.37□□□□□ -1.55
COL2A1P02458 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.37□□□□□ -1.55
COL2A1P02458 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.37□□□□□ -1.55
COL2A1P02458 RPS29P17-201ENST00000430795 166 ntBASIC5.37□□□□□ -1.55
COL2A1P02458 FTH1P16-201ENST00000435241 552 ntBASIC5.37□□□□□ -1.55
COL2A1P02458 DHFRP3-201ENST00000455595 559 ntBASIC5.37□□□□□ -1.55
COL2A1P02458 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.37□□□□□ -1.55
COL2A1P02458 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL2A1P02458 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.37□□□□□ -1.55
COL2A1P02458 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.37□□□□□ -1.55
COL2A1P02458 AC114781.5-201ENST00000615297 108 ntBASIC5.37□□□□□ -1.55
COL2A1P02458 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
COL2A1P02458 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms