Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LDLRP01130 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.02□□□□□ -1.61
LDLRP01130 AL022393.1-201ENST00000625142 1677 ntBASIC5.02□□□□□ -1.61
LDLRP01130 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LDLRP01130 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LDLRP01130 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LDLRP01130 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.02□□□□□ -1.61
LDLRP01130 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.01□□□□□ -1.61
LDLRP01130 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LDLRP01130 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
LDLRP01130 ZNF652P1-201ENST00000442420 1309 ntBASIC5.01□□□□□ -1.61
LDLRP01130 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.01□□□□□ -1.61
LDLRP01130 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LDLRP01130 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LDLRP01130 RBPJP2-201ENST00000618187 1444 ntBASIC5.01□□□□□ -1.61
LDLRP01130 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
LDLRP01130 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LDLRP01130 RNA5SP335-201ENST00000363817 110 ntBASIC5.01□□□□□ -1.61
LDLRP01130 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LDLRP01130 VDAC2P1-201ENST00000399358 958 ntBASIC5.01□□□□□ -1.61
LDLRP01130 DBIP1-201ENST00000401435 260 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.01□□□□□ -1.61
LDLRP01130 ARL2BPP3-201ENST00000421226 480 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AC108075.1-201ENST00000424692 529 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AL049745.1-201ENST00000433953 286 ntBASIC5.01□□□□□ -1.61
LDLRP01130 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LDLRP01130 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.01□□□□□ -1.61
LDLRP01130 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.01□□□□□ -1.61
LDLRP01130 AL353898.1-201ENST00000444055 238 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.01□□□□□ -1.61
LDLRP01130 TPT1P13-201ENST00000449760 499 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AL389915.2-201ENST00000454576 441 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AL035090.1-201ENST00000454835 332 ntBASIC5.01□□□□□ -1.61
LDLRP01130 BX284632.1-201ENST00000478218 541 ntBASIC5.01□□□□□ -1.61
LDLRP01130 RN7SL447P-201ENST00000494711 245 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.01□□□□□ -1.61
LDLRP01130 RPEP1-201ENST00000504507 658 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AC016550.1-201ENST00000505348 785 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AC118282.1-201ENST00000506408 765 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.01□□□□□ -1.61
LDLRP01130 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LDLRP01130 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.01□□□□□ -1.61
LDLRP01130 RNU6-415P-201ENST00000516252 97 ntBASIC5.01□□□□□ -1.61
LDLRP01130 SNORA76.2-201ENST00000517095 137 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.01□□□□□ -1.61
LDLRP01130 AC113192.3-201ENST00000529152 742 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AC004923.2-201ENST00000529649 369 ntBASIC5.01□□□□□ -1.61
LDLRP01130 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.01□□□□□ -1.61
LDLRP01130 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
LDLRP01130 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.01□□□□□ -1.61
LDLRP01130 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.01□□□□□ -1.61
LDLRP01130 OR11J2P-201ENST00000555298 907 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.01□□□□□ -1.61
LDLRP01130 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.01□□□□□ -1.61
LDLRP01130 AL132657.2-201ENST00000564417 358 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
LDLRP01130 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.01□□□□□ -1.61
LDLRP01130 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.01□□□□□ -1.61
LDLRP01130 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.01□□□□□ -1.61
LDLRP01130 AC012616.1-201ENST00000600294 197 ntBASIC5.01□□□□□ -1.61
LDLRP01130 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.01□□□□□ -1.61
LDLRP01130 MTCO2P22-201ENST00000603246 681 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AP004372.1-201ENST00000604842 844 ntBASIC5.01□□□□□ -1.61
LDLRP01130 FAM25E-202ENST00000608562 189 ntBASIC5.01□□□□□ -1.61
LDLRP01130 AL163051.2-201ENST00000618976 735 ntBASIC5.01□□□□□ -1.61
LDLRP01130 BX005214.3-202ENST00000619809 325 ntBASIC5.01□□□□□ -1.61
LDLRP01130 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.01□□□□□ -1.61
LDLRP01130 AC091953.3-201ENST00000623220 236 ntBASIC5.01□□□□□ -1.61
LDLRP01130 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
LDLRP01130 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LDLRP01130 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LDLRP01130 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LDLRP01130 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LDLRP01130 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
LDLRP01130 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LDLRP01130 AC007996.1-201ENST00000620414 2821 ntBASIC5.01□□□□□ -1.61
LDLRP01130 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5□□□□□ -1.61
LDLRP01130 AP001642.1-201ENST00000624727 2117 ntBASIC5□□□□□ -1.61
LDLRP01130 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5□□□□□ -1.61
LDLRP01130 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5□□□□□ -1.61
LDLRP01130 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LDLRP01130 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LDLRP01130 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
LDLRP01130 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LDLRP01130 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LDLRP01130 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
LDLRP01130 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LDLRP01130 SFR1P2-201ENST00000421841 730 ntBASIC5□□□□□ -1.61
LDLRP01130 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5□□□□□ -1.61
LDLRP01130 AC006065.1-201ENST00000422539 802 ntBASIC5□□□□□ -1.61
LDLRP01130 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5□□□□□ -1.61
LDLRP01130 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5□□□□□ -1.61
LDLRP01130 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5□□□□□ -1.61
LDLRP01130 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5□□□□□ -1.61
LDLRP01130 RPL34P6-201ENST00000432390 345 ntBASIC5□□□□□ -1.61
LDLRP01130 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5□□□□□ -1.61
LDLRP01130 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5□□□□□ -1.61
LDLRP01130 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5□□□□□ -1.61
LDLRP01130 AL158053.1-201ENST00000441503 453 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms