Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.6□□□□□ -1.67
LMX1BO60663 HMGB1P3-201ENST00000502802 616 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 OR5H3P-201ENST00000502817 919 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 AK4P6-201ENST00000505168 528 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.6□□□□□ -1.67
LMX1BO60663 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.6□□□□□ -1.67
LMX1BO60663 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.6□□□□□ -1.67
LMX1BO60663 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.6□□□□□ -1.67
LMX1BO60663 OR8K4P-201ENST00000534608 872 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.6□□□□□ -1.67
LMX1BO60663 AC126177.5-201ENST00000549599 178 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.6□□□□□ -1.67
LMX1BO60663 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.6□□□□□ -1.67
LMX1BO60663 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.6□□□□□ -1.67
LMX1BO60663 RBM22P1-201ENST00000578589 1214 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.6□□□□□ -1.67
LMX1BO60663 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.6□□□□□ -1.67
LMX1BO60663 BNIP3P24-201ENST00000593398 557 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 AC008751.2-201ENST00000597885 980 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 AL022067.1-201ENST00000602426 454 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 AC013444.2-201ENST00000603317 787 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 AL157392.4-201ENST00000609756 345 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 MIR6820-201ENST00000611508 62 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 U6.48-201ENST00000618523 106 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.6□□□□□ -1.67
LMX1BO60663 AC090617.9-201ENST00000623751 147 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
LMX1BO60663 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.6□□□□□ -1.67
LMX1BO60663 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.6□□□□□ -1.67
LMX1BO60663 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.6□□□□□ -1.67
LMX1BO60663 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LMX1BO60663 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMX1BO60663 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LMX1BO60663 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.59□□□□□ -1.67
LMX1BO60663 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
LMX1BO60663 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
LMX1BO60663 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LMX1BO60663 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LMX1BO60663 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LMX1BO60663 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LMX1BO60663 MIR133B-201ENST00000362210 119 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 RNA5SP305-201ENST00000362665 119 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LMX1BO60663 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LMX1BO60663 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LMX1BO60663 SNORA48.4-201ENST00000391089 134 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 HMGB3P19-201ENST00000403971 560 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 AP002530.1-201ENST00000405705 684 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.59□□□□□ -1.67
LMX1BO60663 VN1R31P-201ENST00000417498 730 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 MTCO2P21-201ENST00000419780 677 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LMX1BO60663 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.59□□□□□ -1.67
LMX1BO60663 VN1R42P-201ENST00000424651 344 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.59□□□□□ -1.67
LMX1BO60663 PRUNEP1-201ENST00000425846 705 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 AC097063.1-201ENST00000426714 1797 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 RPL12P17-201ENST00000432393 498 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.59□□□□□ -1.67
LMX1BO60663 AL672138.1-201ENST00000450604 1015 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 AC008379.1-201ENST00000463655 464 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.59□□□□□ -1.67
LMX1BO60663 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LMX1BO60663 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
LMX1BO60663 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.59□□□□□ -1.67
LMX1BO60663 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.59□□□□□ -1.67
LMX1BO60663 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.59□□□□□ -1.67
LMX1BO60663 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.59□□□□□ -1.67
LMX1BO60663 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.59□□□□□ -1.67
LMX1BO60663 AC138832.1-201ENST00000522871 556 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.59□□□□□ -1.67
LMX1BO60663 AC004923.2-201ENST00000529649 369 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.59□□□□□ -1.67
LMX1BO60663 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
LMX1BO60663 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.59□□□□□ -1.67
LMX1BO60663 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.59□□□□□ -1.67
LMX1BO60663 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 AC114947.2-201ENST00000565748 2125 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LMX1BO60663 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.59□□□□□ -1.67
LMX1BO60663 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.59□□□□□ -1.67
LMX1BO60663 AC022022.2-201ENST00000602989 360 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 AC002069.2-201ENST00000603580 883 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 AC079880.2-201ENST00000603790 1213 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 RNU4-5P-201ENST00000607255 135 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.59□□□□□ -1.67
LMX1BO60663 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.59□□□□□ -1.67
LMX1BO60663 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
LMX1BO60663 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LMX1BO60663 AC109583.2-201ENST00000617367 129 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 AC078880.5-201ENST00000617845 421 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 AL669942.2-201ENST00000620352 697 ntBASIC4.59□□□□□ -1.67
LMX1BO60663 AP001784.1-201ENST00000624107 428 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms