Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CUX2O14529 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC8.03□□□□□ -1.12
CUX2O14529 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC8.03□□□□□ -1.12
CUX2O14529 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CUX2O14529 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
CUX2O14529 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.12
CUX2O14529 LARP1BP1-201ENST00000506036 1359 ntBASIC8.02□□□□□ -1.13
CUX2O14529 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CUX2O14529 RNU6-1279P-201ENST00000383917 103 ntBASIC8.02□□□□□ -1.13
CUX2O14529 AL356276.2-201ENST00000435919 558 ntBASIC8.02□□□□□ -1.13
CUX2O14529 AC007967.1-201ENST00000455422 1159 ntBASIC8.02□□□□□ -1.13
CUX2O14529 RPS27AP16-201ENST00000492222 470 ntBASIC8.02□□□□□ -1.13
CUX2O14529 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC8.02□□□□□ -1.13
CUX2O14529 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC8.02□□□□□ -1.13
CUX2O14529 DPPA3P2-201ENST00000553589 478 ntBASIC8.02□□□□□ -1.13
CUX2O14529 AC112230.1-201ENST00000604342 547 ntBASIC8.02□□□□□ -1.13
CUX2O14529 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC8.02□□□□□ -1.13
CUX2O14529 AC019176.2-201ENST00000611579 315 ntBASIC8.02□□□□□ -1.13
CUX2O14529 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
CUX2O14529 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC8.02□□□□□ -1.13
CUX2O14529 AC092451.3-201ENST00000625067 1343 ntBASIC8.02□□□□□ -1.13
CUX2O14529 AC120036.2-201ENST00000509729 1474 ntBASIC8.02□□□□□ -1.13
CUX2O14529 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CUX2O14529 AC027228.2-201ENST00000567141 2154 ntBASIC8.02□□□□□ -1.13
CUX2O14529 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC8.01□□□□□ -1.13
CUX2O14529 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC8.01□□□□□ -1.13
CUX2O14529 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CUX2O14529 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CUX2O14529 RNA5SP241-201ENST00000391326 114 ntBASIC8.01□□□□□ -1.13
CUX2O14529 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC8.01□□□□□ -1.13
CUX2O14529 RPL5P32-201ENST00000454085 879 ntBASIC8.01□□□□□ -1.13
CUX2O14529 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC8.01□□□□□ -1.13
CUX2O14529 RN7SL652P-201ENST00000577769 300 ntBASIC8.01□□□□□ -1.13
CUX2O14529 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC8.01□□□□□ -1.13
CUX2O14529 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC8.01□□□□□ -1.13
CUX2O14529 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
CUX2O14529 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CUX2O14529 AL929601.4-201ENST00000613011 1341 ntBASIC8.01□□□□□ -1.13
CUX2O14529 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC8.01□□□□□ -1.13
CUX2O14529 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CUX2O14529 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC8.01□□□□□ -1.13
CUX2O14529 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
CUX2O14529 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC8□□□□□ -1.13
CUX2O14529 UBE2Q2P12-201ENST00000414573 204 ntBASIC8□□□□□ -1.13
CUX2O14529 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC8□□□□□ -1.13
CUX2O14529 GAPDHP14-201ENST00000450472 937 ntBASIC8□□□□□ -1.13
CUX2O14529 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC8□□□□□ -1.13
CUX2O14529 AC128716.1-201ENST00000475129 166 ntBASIC8□□□□□ -1.13
CUX2O14529 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC8□□□□□ -1.13
CUX2O14529 AC116553.2-201ENST00000564203 463 ntBASIC8□□□□□ -1.13
CUX2O14529 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC8□□□□□ -1.13
CUX2O14529 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC8□□□□□ -1.13
CUX2O14529 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CUX2O14529 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC8□□□□□ -1.13
CUX2O14529 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
CUX2O14529 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CUX2O14529 WAC-209ENST00000428935 1320 ntTSL 2 BASIC8□□□□□ -1.13
CUX2O14529 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CUX2O14529 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CUX2O14529 EIF2AP4-201ENST00000424793 1781 ntBASIC8□□□□□ -1.13
CUX2O14529 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CUX2O14529 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC8□□□□□ -1.13
CUX2O14529 RNU1-132P-201ENST00000364300 164 ntBASIC8□□□□□ -1.13
CUX2O14529 MT-RNR1-201ENST00000389680 954 ntBASIC8□□□□□ -1.13
CUX2O14529 RNU1-82P-201ENST00000390851 165 ntBASIC8□□□□□ -1.13
CUX2O14529 RN7SKP16-201ENST00000410180 299 ntBASIC8□□□□□ -1.13
CUX2O14529 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC8□□□□□ -1.13
CUX2O14529 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC8□□□□□ -1.13
CUX2O14529 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC8□□□□□ -1.13
CUX2O14529 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC8□□□□□ -1.13
CUX2O14529 AC024224.1-201ENST00000538284 609 ntBASIC8□□□□□ -1.13
CUX2O14529 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC8□□□□□ -1.13
CUX2O14529 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC8□□□□□ -1.13
CUX2O14529 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC8□□□□□ -1.13
CUX2O14529 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CUX2O14529 TLK1P1-201ENST00000456760 2440 ntBASIC7.99□□□□□ -1.13
CUX2O14529 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
CUX2O14529 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.99□□□□□ -1.13
CUX2O14529 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CUX2O14529 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CUX2O14529 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CUX2O14529 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC7.99□□□□□ -1.13
CUX2O14529 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.99□□□□□ -1.13
CUX2O14529 AC093297.3-201ENST00000607056 2517 ntBASIC7.99□□□□□ -1.13
CUX2O14529 HIST1H2APS3-201ENST00000403259 134 ntBASIC7.99□□□□□ -1.13
CUX2O14529 RPL5P2-201ENST00000429598 854 ntBASIC7.99□□□□□ -1.13
CUX2O14529 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC7.99□□□□□ -1.13
CUX2O14529 AC097486.1-201ENST00000515331 210 ntBASIC7.99□□□□□ -1.13
CUX2O14529 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC7.99□□□□□ -1.13
CUX2O14529 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC7.99□□□□□ -1.13
CUX2O14529 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC7.99□□□□□ -1.13
CUX2O14529 AC112484.5-201ENST00000624189 228 ntBASIC7.99□□□□□ -1.13
CUX2O14529 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CUX2O14529 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CUX2O14529 AC092376.2-201ENST00000622621 4116 ntBASIC7.99□□□□□ -1.13
CUX2O14529 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC7.99□□□□□ -1.13
CUX2O14529 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC7.98□□□□□ -1.13
CUX2O14529 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CUX2O14529 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC7.98□□□□□ -1.13
CUX2O14529 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms