Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC090142.1-201ENST00000465776 462 ntBASIC3.88□□□□□ -1.79
SDCBPO00560 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.88□□□□□ -1.79
SDCBPO00560 AC110775.1-201ENST00000513721 462 ntBASIC3.88□□□□□ -1.79
SDCBPO00560 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.88□□□□□ -1.79
SDCBPO00560 AC022882.1-201ENST00000532142 501 ntBASIC3.88□□□□□ -1.79
SDCBPO00560 AC100770.1-201ENST00000532310 322 ntBASIC3.88□□□□□ -1.79
SDCBPO00560 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.88□□□□□ -1.79
SDCBPO00560 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.88□□□□□ -1.79
SDCBPO00560 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.88□□□□□ -1.79
SDCBPO00560 HMGB2P1-201ENST00000591146 634 ntBASIC3.88□□□□□ -1.79
SDCBPO00560 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.88□□□□□ -1.79
SDCBPO00560 OR7E18P-201ENST00000592589 702 ntBASIC3.88□□□□□ -1.79
SDCBPO00560 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.88□□□□□ -1.79
SDCBPO00560 RPL7P50-201ENST00000600588 727 ntBASIC3.88□□□□□ -1.79
SDCBPO00560 AL353726.1-201ENST00000614041 1000 ntBASIC3.88□□□□□ -1.79
SDCBPO00560 SNX18P1Y-201ENST00000616231 511 ntBASIC3.88□□□□□ -1.79
SDCBPO00560 AL669942.2-201ENST00000620352 697 ntBASIC3.88□□□□□ -1.79
SDCBPO00560 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SDCBPO00560 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SDCBPO00560 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.88□□□□□ -1.79
SDCBPO00560 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SDCBPO00560 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SDCBPO00560 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SDCBPO00560 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SDCBPO00560 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SDCBPO00560 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SDCBPO00560 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.88□□□□□ -1.79
SDCBPO00560 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SDCBPO00560 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SDCBPO00560 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SDCBPO00560 MAPK10-304ENST00000641341 3984 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SDCBPO00560 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SDCBPO00560 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SDCBPO00560 RNA5SP151-201ENST00000365632 117 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 SNORA51.8-201ENST00000384234 132 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 MIR323B-201ENST00000385269 82 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 GAPDHP15-201ENST00000398586 975 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 VDAC2P1-201ENST00000399358 958 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 AL139039.2-201ENST00000407436 479 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SDCBPO00560 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.87□□□□□ -1.79
SDCBPO00560 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SDCBPO00560 AC007559.1-201ENST00000428736 355 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SDCBPO00560 H2AFZP5-201ENST00000446960 382 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 RBMY2TP-201ENST00000451162 947 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.87□□□□□ -1.79
SDCBPO00560 RPL7P16-201ENST00000479738 738 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 AC090013.1-201ENST00000485147 480 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 AC004453.1-201ENST00000487895 408 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.87□□□□□ -1.79
SDCBPO00560 AC098799.3-201ENST00000506095 438 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 AC138409.2-202ENST00000507274 458 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SDCBPO00560 RNA5SP360-201ENST00000516555 118 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 AC021733.2-201ENST00000518830 497 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.87□□□□□ -1.79
SDCBPO00560 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.87□□□□□ -1.79
SDCBPO00560 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.87□□□□□ -1.79
SDCBPO00560 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.87□□□□□ -1.79
SDCBPO00560 OR5AZ1P-201ENST00000527448 943 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.87□□□□□ -1.79
SDCBPO00560 AP001880.2-201ENST00000538233 448 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.87□□□□□ -1.79
SDCBPO00560 GLRXP2-201ENST00000555594 321 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 AC044860.2-201ENST00000561005 179 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 BGLT3-201ENST00000564523 994 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 MIR3667-201ENST00000581025 74 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.87□□□□□ -1.79
SDCBPO00560 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.87□□□□□ -1.79
SDCBPO00560 RPL26P30-202ENST00000602923 645 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.87□□□□□ -1.79
SDCBPO00560 AL391684.1-202ENST00000641293 1636 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SDCBPO00560 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.87□□□□□ -1.79
SDCBPO00560 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SDCBPO00560 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SDCBPO00560 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SDCBPO00560 OR51H2P-202ENST00000641424 3046 ntBASIC3.87□□□□□ -1.79
SDCBPO00560 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SDCBPO00560 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SDCBPO00560 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.86□□□□□ -1.79
SDCBPO00560 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SDCBPO00560 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SDCBPO00560 AC104118.1-201ENST00000607625 1589 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SDCBPO00560 AC091046.3-201ENST00000631455 1574 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SDCBPO00560 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SDCBPO00560 RN7SKP149-201ENST00000363008 344 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 RNA5SP28-201ENST00000363841 119 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.86□□□□□ -1.79
SDCBPO00560 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.86□□□□□ -1.79
SDCBPO00560 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SDCBPO00560 AL645733.1-201ENST00000402250 217 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 Z98745.1-201ENST00000402553 494 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 NRBF2P3-201ENST00000432731 865 ntBASIC3.86□□□□□ -1.79
SDCBPO00560 TMX2P1-201ENST00000436507 708 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms