Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC098935.2-201ENST00000604222 466 ntBASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 MIR6853-201ENST00000619642 74 ntBASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 OR4G1P-202ENST00000641173 1788 ntBASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TMX2-CTNND1H3BSU7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 KARSP3-201ENST00000571212 1504 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL035079.1-201ENST00000405210 287 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC004074.1-201ENST00000421810 1063 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 RPL18P10-201ENST00000425606 538 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 TXNP5-201ENST00000441043 315 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC002553.2-201ENST00000453217 340 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 EIF2S2P5-201ENST00000457635 968 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 RPL23AP56-201ENST00000460778 453 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC090686.1-201ENST00000481577 749 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 DEFB109F-201ENST00000491870 277 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC093720.1-201ENST00000505681 714 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC111000.3-201ENST00000508057 576 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC009643.1-201ENST00000532030 391 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC136624.4-201ENST00000573044 370 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 RN7SL176P-201ENST00000580352 264 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC020915.5-201ENST00000596836 964 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC093765.1-201ENST00000603758 881 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL034374.2-201ENST00000605281 548 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 OR7M1P-201ENST00000608946 533 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC016252.1-201ENST00000609721 474 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 TMEM30CP-203ENST00000637814 1035 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 CDC27P2-201ENST00000425026 1922 ntBASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
TMX2-CTNND1H3BSU7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 MFSD8-242ENST00000641690 4199 ntBASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 SNORA70.2-201ENST00000364506 135 ntBASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 RNA5SP332-201ENST00000391063 115 ntBASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC013429.2-201ENST00000418798 781 ntBASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC092905.1-201ENST00000467527 949 ntBASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 AGGF1P9-201ENST00000561884 913 ntBASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC104687.2-201ENST00000604442 342 ntBASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC018695.5-201ENST00000605872 315 ntBASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 RNU6-84P-201ENST00000607737 102 ntBASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 FAM27B-201ENST00000610601 213 ntBASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 MIR7703-201ENST00000620784 77 ntBASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC016717.3-201ENST00000624730 554 ntBASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms