Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 RNA5SP183-201ENST00000362452 119 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 RNA5SP242-201ENST00000364171 118 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 NUDT19P3-201ENST00000404698 555 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 LIPT1P1-201ENST00000415870 1186 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC013429.2-201ENST00000418798 781 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 USP9YP21-201ENST00000420603 432 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 COX6CP13-201ENST00000428703 226 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 ELOCP13-201ENST00000443934 329 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 MRPL35P2-201ENST00000448009 511 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 PSMC1P13-201ENST00000458195 985 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AL139824.2-201ENST00000458731 1095 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 RN7SL717P-201ENST00000478343 297 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 UBA52P7-201ENST00000486088 380 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC020699.1-201ENST00000505161 445 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AP002884.5-201ENST00000595053 1132 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC018618.2-201ENST00000604770 446 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 Z95327.3-201ENST00000610385 572 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AP004607.9-201ENST00000618202 316 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC024023.1-201ENST00000624530 922 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AC135068.12-201ENST00000637370 931 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 AL121950.1-201ENST00000624993 2077 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 NXF4-202ENST00000416098 1465 ntBASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TCRBV7S3A2A0A539 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC000374.1-201ENST00000434698 1745 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC026523.2-201ENST00000625039 7739 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 RNU5B-1-201ENST00000363286 116 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 SNORA67-201ENST00000384423 137 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 MIR600-201ENST00000385007 98 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC007738.1-201ENST00000413892 348 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AL513325.1-201ENST00000417716 1034 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 LINC01347-201ENST00000417964 355 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC093655.2-201ENST00000425735 631 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC093422.3-201ENST00000428506 305 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 GAPDHP34-201ENST00000432112 823 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AL035246.1-201ENST00000433554 1255 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 MTND2P8-201ENST00000450555 1025 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC144530.1-201ENST00000452862 555 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 GTF2IP12-201ENST00000456547 356 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC091180.1-201ENST00000462104 372 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 RPS4XP1-201ENST00000482189 787 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC005868.1-201ENST00000536421 331 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 RN7SL622P-201ENST00000585292 275 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC009974.1-201ENST00000608881 455 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AL157392.4-201ENST00000609756 345 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC090527.3-201ENST00000619041 548 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC010435.1-201ENST00000623353 1177 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 AC006963.1-201ENST00000624003 1052 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 SAMMSON-209ENST00000641222 1100 ntBASIC5.17□□□□□ -1.58
TCRBV7S3A2A0A539 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms