Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRBV5-4A0A0C4DH59 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
TRBV5-4A0A0C4DH59 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRBV5-4A0A0C4DH59 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
TRBV5-4A0A0C4DH59 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC097461.1-201ENST00000568928 2821 ntBASIC4.63□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC010928.1-201ENST00000592477 1447 ntBASIC4.63□□□□□ -1.67
TRBV5-4A0A0C4DH59 RBPJP2-201ENST00000618187 1444 ntBASIC4.63□□□□□ -1.67
TRBV5-4A0A0C4DH59 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 KARSP3-201ENST00000571212 1504 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 OR56B2P-201ENST00000317102 954 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL590240.1-201ENST00000334118 313 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 SNORA27.3-201ENST00000364937 134 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL359643.1-201ENST00000404109 423 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 MTND2P11-201ENST00000423638 648 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 RNF19BPX-201ENST00000426224 625 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 RPS26P2-201ENST00000440331 348 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 RPS15AP29-201ENST00000445539 400 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC112206.1-201ENST00000468416 477 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC108751.2-201ENST00000469993 231 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 OR8K2P-201ENST00000524645 927 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 OR5M2P-201ENST00000529003 936 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 RN7SL690P-201ENST00000582087 240 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC209154.1-201ENST00000582156 337 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC012213.4-201ENST00000606457 354 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL592494.3-201ENST00000609485 464 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 LINC00216-201ENST00000623548 1126 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 AP001784.1-201ENST00000624107 428 ntBASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRBV5-4A0A0C4DH59 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 SMG1P4-204ENST00000523028 4131 ntBASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 RNVU1-6-201ENST00000364688 164 ntBASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 UBBP2-201ENST00000376781 231 ntBASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 MTND4LP14-201ENST00000429447 288 ntBASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 BUD31P2-201ENST00000449374 300 ntBASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC104629.2-201ENST00000468627 598 ntBASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC108157.1-201ENST00000510511 539 ntBASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 AP001804.2-201ENST00000533932 910 ntBASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC008147.3-201ENST00000548666 354 ntBASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 AL356317.1-201ENST00000396110 1436 ntBASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC011503.2-201ENST00000594230 1500 ntBASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRBV5-4A0A0C4DH59 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms