Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 MTCO3P21-201ENST00000430791 643 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AL136038.1-201ENST00000497246 351 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 RPEP1-201ENST00000504507 658 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC016550.3-201ENST00000515706 767 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 RNA5SP497-201ENST00000516081 97 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 CASP1P2-201ENST00000526830 1258 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 RPL21P7-201ENST00000557463 483 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 RPL10P14-201ENST00000565265 298 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AL139286.1-201ENST00000604465 483 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC073111.2-201ENST00000605657 1075 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AL049794.2-201ENST00000616301 365 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 HTR1DP1-201ENST00000616500 888 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC009032.1-201ENST00000617574 431 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 RMST_9.1-201ENST00000619945 193 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 MIR6813-201ENST00000621638 56 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC012414.7-202ENST00000622705 1090 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC055839.1-201ENST00000634467 498 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC009313.2-201ENST00000417893 1941 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 ZNF733P-202ENST00000444809 1573 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 OR13C1P-202ENST00000641378 2919 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AL445437.1-201ENST00000623157 3087 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 RNA5SP502-201ENST00000362694 119 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 RNU1-83P-201ENST00000363426 164 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC093719.1-202ENST00000392735 373 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 RNU2-50P-201ENST00000410494 143 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AL133325.1-201ENST00000421090 382 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 FABP7P1-201ENST00000424004 391 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 RPS27P18-201ENST00000431701 247 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 HLA-DPA3-207ENST00000454398 229 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 RPL7P45-201ENST00000455851 743 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 Z92846.1-201ENST00000456203 268 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC104339.1-201ENST00000465478 348 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC021087.2-201ENST00000504656 1203 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC108471.1-201ENST00000513977 287 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 GSTP1P1-201ENST00000548078 319 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC079075.1-201ENST00000559543 878 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 MIMT1-201ENST00000597105 1050 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC067773.1-201ENST00000603284 1094 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC104687.2-201ENST00000604442 342 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 IMMP1LP1-201ENST00000605170 488 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC004948.1-201ENST00000609858 672 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC015813.4-201ENST00000610469 179 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC026368.1-201ENST00000614934 690 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC015908.5-201ENST00000623289 343 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms