Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AC079097.1-201ENST00000512187 1399 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 CIR1P2-201ENST00000514821 1342 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 METTL21EP-201ENST00000298105 713 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 BMS1P3-201ENST00000372011 932 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AL021331.1-201ENST00000402817 582 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AP000357.1-201ENST00000409926 1165 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 BX510359.3-201ENST00000422168 306 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AL121776.1-201ENST00000429337 372 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 RPL12P28-201ENST00000430852 489 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AC138761.5-201ENST00000433967 325 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 PTGES3P1-201ENST00000439531 483 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 Z73417.1-201ENST00000447373 778 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 ZNF886P-201ENST00000450781 723 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 MTCO2P6-201ENST00000463134 685 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AL136038.1-201ENST00000497246 351 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AC090638.1-201ENST00000498296 909 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AC025260.1-201ENST00000548858 430 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AC015720.2-201ENST00000567709 334 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 RBM22P1-201ENST00000578589 1214 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 MIR3176-201ENST00000582210 90 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AC002487.1-201ENST00000604565 994 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 Z99289.3-201ENST00000605586 594 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AC024060.1-201ENST00000607052 494 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AC138907.10-201ENST00000623708 983 ntBASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.08□□□□□ -1.6
DTX4Q9Y2E6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 SNORD56.6-201ENST00000384569 71 ntBASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 Y_RNA.578-201ENST00000390903 88 ntBASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 AL391361.1-201ENST00000405580 489 ntBASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 BMS1P13-201ENST00000417301 885 ntBASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 OR2X1P-201ENST00000421144 687 ntBASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 NDUFB4P8-201ENST00000435351 367 ntBASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 AC092170.1-201ENST00000440211 356 ntBASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 AC073465.2-201ENST00000440938 498 ntBASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 CR769776.1-201ENST00000441254 787 ntBASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 AL035090.1-201ENST00000454835 332 ntBASIC5.07□□□□□ -1.6
DTX4Q9Y2E6 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms