Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SNORA19.3-201ENST00000516165 130 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 MTCYBP23-201ENST00000558717 1102 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AC090888.2-201ENST00000559765 1144 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AC069307.1-201ENST00000602820 447 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AL160237.3-201ENST00000604114 1013 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 TAS2R6P-201ENST00000605022 826 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AL445222.1-201ENST00000607259 628 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AC093673.2-201ENST00000609674 331 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AL136295.6-201ENST00000610486 658 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AC011503.2-201ENST00000594230 1500 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AC026523.2-201ENST00000625039 7739 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 AC092111.2-201ENST00000611627 1414 ntBASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
SSX2IPQ9Y2D8 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 RNU6-252P-201ENST00000363232 107 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 RNU1-43P-201ENST00000365052 165 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 RNY3P9-201ENST00000384727 106 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 MIR550A3-201ENST00000390735 95 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AL589647.1-201ENST00000402485 466 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AL133388.1-201ENST00000404509 287 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AP002530.1-201ENST00000405705 684 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 RNA5SP296-201ENST00000410523 111 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 NANOGP5-201ENST00000424456 877 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 RPL12P28-201ENST00000430852 489 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 GSTM5P1-201ENST00000434751 660 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 MED6P1-201ENST00000439659 713 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AL358794.1-201ENST00000445689 381 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 GAPDHP25-201ENST00000447061 1001 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC073850.1-201ENST00000449243 255 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 OTX2P1-201ENST00000450956 354 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 RPL7P40-201ENST00000481703 745 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC116562.1-201ENST00000485355 781 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC021146.7-201ENST00000509604 775 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC119751.5-201ENST00000514077 770 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 RNU6-311P-201ENST00000516224 102 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC091163.3-201ENST00000518269 1144 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AP001207.2-201ENST00000519490 539 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 OR5D15P-201ENST00000531671 942 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AL359219.2-201ENST00000555184 348 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC084373.1-201ENST00000603311 235 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC007786.3-201ENST00000615154 596 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC109583.2-201ENST00000617367 129 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 CDC27P2-201ENST00000425026 1922 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC018809.2-201ENST00000602436 3823 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 AC133552.1-201ENST00000569988 4007 ntBASIC5.81□□□□□ -1.48
SSX2IPQ9Y2D8 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AC112198.2-201ENST00000426589 6996 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 OR4F13P-202ENST00000560066 2054 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 AL121886.1-201ENST00000358609 435 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 RN7SKP185-201ENST00000362813 326 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 SNORA17.1-201ENST00000362945 126 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 RNU6-796P-201ENST00000391086 107 ntBASIC5.8□□□□□ -1.48
SSX2IPQ9Y2D8 HMGB1P10-201ENST00000395823 563 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms