Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 MUC2-202ENST00000613187 4845 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 U8.4-201ENST00000363626 134 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 RNU4-27P-201ENST00000410889 139 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 HSPE1P16-201ENST00000426640 348 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AL160175.1-201ENST00000428124 247 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 BX119904.1-201ENST00000432026 348 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC090018.1-201ENST00000434369 367 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC245047.2-201ENST00000441060 530 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AL389915.2-201ENST00000454576 441 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 RPS4XP12-201ENST00000461747 709 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC093270.2-201ENST00000486157 792 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 IMPA1P1-201ENST00000510718 842 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC109464.1-201ENST00000511091 819 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 Y_RNA.717-201ENST00000517106 92 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AP003355.1-201ENST00000518956 587 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC106730.2-201ENST00000566641 540 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC005341.1-201ENST00000571086 708 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 MIR4646-201ENST00000580775 63 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 RN7SL708P-201ENST00000580952 299 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 BNIP3P38-201ENST00000601117 544 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC087763.1-201ENST00000603391 286 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC079880.2-201ENST00000603790 1213 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC025175.1-201ENST00000606482 759 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC012557.1-201ENST00000607115 611 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC244107.2-201ENST00000611773 76 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 AC109583.2-201ENST00000617367 129 ntBASIC5.34□□□□□ -1.55
NCKIPSDQ9NZQ3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 AL034549.2-201ENST00000618285 3373 ntBASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 HMGB1P10-201ENST00000395823 563 ntBASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 ATP5HP3-201ENST00000396994 486 ntBASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 AL136131.1-201ENST00000406079 803 ntBASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 PCNPP4-201ENST00000414817 517 ntBASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 RRM2P4-201ENST00000441721 562 ntBASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 RPL7P55-201ENST00000450522 746 ntBASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 AL139824.2-201ENST00000458731 1095 ntBASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 NDUFA5P12-201ENST00000503796 343 ntBASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 ENPP7P11-201ENST00000505915 627 ntBASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 AC108120.2-201ENST00000512973 294 ntBASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 EIF3KP3-201ENST00000514461 639 ntBASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 AC022360.1-201ENST00000521058 340 ntBASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 OR5D15P-201ENST00000531671 942 ntBASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.33□□□□□ -1.56
NCKIPSDQ9NZQ3 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 209.7 ms